Gene Lferr_0469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0469 
Symbol 
ID6876421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp441518 
End bp442669 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content59% 
IMG OID642788342 
Producthomoserine O-acetyltransferase 
Protein accessionYP_002218930 
Protein GI198282609 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2021] Homoserine acetyltransferase 
TIGRFAM ID[TIGR01392] homoserine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.239715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000710026 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAGTAG AGATACCCGC CGATTCCGTT GGACTGGTGA CCCCGCAGAC TGTGACCTTT 
TCGGCACCTC TGGAGCTGGA GTGCGGGCGC TCGCTGCCTG GCTACACCCT CACCTATGAG
ACCTACGGCA CACTCAATGC GCAGCGGAGC AACGCCATCC TGCTCTGCCA TGCCCTTTCC
GGCGACCACC ACGCAGCTGG CTATCACAGC ATGGACGATC GCAAACCCGG CTGGTGGGAA
CACTTGCTGG GACCGGGAAA GGCCATGGAT ACGGAGCGGT TTTTCTTTGT CTGCGCCAAC
TTCATCGGCT CCTGCAAGGG GTCCACCGGC CCAGCCAGTA CCAATCCGGA AACCGGCGCA
CCCTGGGGAT TGGATTTTCC CATGGTCACC GTGCGCGACT GGGTCAAAAC CCAGGCCGAA
CTGGCAGACT ATCTGGGCAT TGAACAGTGG GCGGCCGTTG TGGGAGGCAG CCTTGGCGGC
ATGCAGGTGA TGCAGTGGAG CATGGATTAT CCGGAGCGCC TGCGGCATGC TGTGGTCATC
GCCGCCGCAC CCAAGCTCAC CGCCCAGAAC ATCGCCTTCA ACGAGGTTTG CCGGCAAGCC
ATCATGACGG ATCCGGAATT TTATAACGGC CGTTATTATG CGCACAACAC CAAACCGCGT
CGCGGCCTGT CGCTGGCACG CATGATCGGC CATATCACCT ATCTCTCCGA CAACGCCATG
CGTACCAAAT TCGGCCGCGA CACCCGTGGC GGCAAGGCAT TCTCCTTCGG CTTCGACGTG
GATTTCGAAG TGGAGAGTTA TCTGCGTTAT CAGGGCTCCA GCTTTGTGGA GCGCTTTGAT
GCCAACAGCT ACCTTTATAT CACCAAGGCC TTGGACTATT TTGATCCGGC CAGCACCTGG
GGGGGCAATC TGGCCGAGGC CTTTGCCTCC ACTCGGGCAA ACTTTCTGGT GATTTCCTTC
AGTTCAGACT GGCGCTTCTC TCCGGAACGC TCCCGTGAAA TCGTGCAAGC CCTGTATACC
TGTAACCGGG ACGTCAGTTA TGCGGAGATC GAGGCGGAGC ATGGTCACGA TTCTTTCCTG
ATGCCCATCC CCCAATACGT GGCAGTGCTG AGCACCTATC TGGGGCGGGT TGCTGAAGAG
ATCGGCGCAT GA
 
Protein sequence
MPVEIPADSV GLVTPQTVTF SAPLELECGR SLPGYTLTYE TYGTLNAQRS NAILLCHALS 
GDHHAAGYHS MDDRKPGWWE HLLGPGKAMD TERFFFVCAN FIGSCKGSTG PASTNPETGA
PWGLDFPMVT VRDWVKTQAE LADYLGIEQW AAVVGGSLGG MQVMQWSMDY PERLRHAVVI
AAAPKLTAQN IAFNEVCRQA IMTDPEFYNG RYYAHNTKPR RGLSLARMIG HITYLSDNAM
RTKFGRDTRG GKAFSFGFDV DFEVESYLRY QGSSFVERFD ANSYLYITKA LDYFDPASTW
GGNLAEAFAS TRANFLVISF SSDWRFSPER SREIVQALYT CNRDVSYAEI EAEHGHDSFL
MPIPQYVAVL STYLGRVAEE IGA