| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0466 |
|---|
| Symbol | |
|---|
| ID | 6876418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 439407 |
|---|
| End bp | 440192 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642788339 |
|---|
| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
|---|
| Protein accession | YP_002218927 |
|---|
| Protein GI | 198282606 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000612243 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC ATCACGAAAA CGGGGAACAG AGTCAGGCAC TGGTGCCGAC CACCCACTTC
GGCTACCAGG AAGTGCCCGA GACGGAGAAG GAGCAACTCG TCAGGGGGGT TTTCAGCAAC
GTCGCCAGCA AATATGACCT GATGAACGAT CTCATGTCCC TCGGAGTCCA CCGCCTGTGG
AAACGCTTTA CCGTAGATCT CGCCCGGCCC CGGCCAGGGC AGCGGGTACT GGATCTGGCG
GGTGGTACGG GCGATCTGGC TGCCGCCATT TATCCGCGGG TGCGGCCCAA CGGCTCCATC
GTGGTCTCGG ACATCAATCC CGAGATGCTG GCGGTGGGGG AAAGCCGGCT GGCCGACAAA
GGCATCATCG CGGGAGTGGA GTTTGTCGAG GCCAATGCCG AGGCCCTGCC TTTCCCTGAC
CGCGAATTCG ATCTGGTCAC CCTGGCTTTC GGCATTCGCA ACATGACCCA TCCCGAAAGG
GCGCTGAAAG AAATTCATCG GGTGCTGAAA ACCGGTGGGC GGGTATTGAT CCTCGAATTC
TCCCATCCAC GCTGGCCCGG TTTGCAGACC ATGTACGATA TGTACTCCTT CAAGTTGTTG
CCGCGAATTG GCGAACTGGT GGCCAAAGAC CGTGAGAGCT ACCAGTATCT GGTGGAATCC
ATCCGCCGCT TCCCCGATCA GGAAACCTTC AAGGTAATGA TGGAAGATGC CGGGCTGGAG
CGGGTGGAGG TATTCAACCT CTCCGGCGGG ATTGTCGCAC TGCATCGCGG GTTCCGGATG
GACTAA
|
|---|
| Protein sequence | MSAHHENGEQ SQALVPTTHF GYQEVPETEK EQLVRGVFSN VASKYDLMND LMSLGVHRLW
KRFTVDLARP RPGQRVLDLA GGTGDLAAAI YPRVRPNGSI VVSDINPEML AVGESRLADK
GIIAGVEFVE ANAEALPFPD REFDLVTLAF GIRNMTHPER ALKEIHRVLK TGGRVLILEF
SHPRWPGLQT MYDMYSFKLL PRIGELVAKD RESYQYLVES IRRFPDQETF KVMMEDAGLE
RVEVFNLSGG IVALHRGFRM D
|
|---|
| |