| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0462 |
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| Symbol | rplU |
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| ID | 6876414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 434106 |
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| End bp | 434417 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642788335 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_002218923 |
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| Protein GI | 198282602 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.953045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00315446 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTACGCGG TCATTGAAAA TGGTGGCAAG CAGTATCGGG TGACAGTGGG CGACAAGCTC
CGGCTCGAAA GAATGGAAAT GGAGCCCGGT GCCGAACTCG CACTGGACCG TGTGCTCATG
GTCGGCGTTG GTGATGATGT CCAGGTCGGC CGACCTCTGG TGGAAGGCGC CGCGGTGAAA
GCCACCGTAC TCAGCCAGGG CCGCGCGAAA AAGGTACATA TTTTCAAGAT GCGTCGGCGC
AAGCACTACC GTAAGCAGCA GGGCCATCGT CAGTACTTTA CCGAAGTCCG CATTACCGGC
ATTGAAGCCT AA
|
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| Protein sequence | MYAVIENGGK QYRVTVGDKL RLERMEMEPG AELALDRVLM VGVGDDVQVG RPLVEGAAVK
ATVLSQGRAK KVHIFKMRRR KHYRKQQGHR QYFTEVRITG IEA
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