Gene Lferr_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0456 
Symbol 
ID6876408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp430158 
End bp430643 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content58% 
IMG OID642788329 
Productcyclase/dehydrase 
Protein accessionYP_002218917 
Protein GI198282596 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000501936 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATCATA TTTGTAAGAC CGCCGTGCTG CCTTACAGTG CGGCGCAGAT TTTTGCCCTG 
ATAGAGGATA TCCGCGCTTA TCCGCAATTT TTACCCTGGT GTGGGCGAAC CCGGATCATC
CAGTCGAAAG AGGATGAAGT GGTTGCCGAG ATCACCATCT CCCACGGCGC TTTTGGCAAA
TCCTTCACCA CCAAAAATCG TTATCAGCGG CCCAAGATGG CGGAGGTGCG GCTGGTCAAT
GGTCCCTTCC GCTTTCTGGA AGGGCTCTGG CAACTGGAAC TGGACGCCAG GGGCACCAAA
GTAACCCTGG ATATGCGTTT CGAGTTCGCG TCCCGGTTGC TGGGCGCATT TCTGGAACCC
ATATTCAAGC AGGCGGCGGA AACCATGGTG CAACGCTTCG CTCAACGTGC GCGGGCCGTA
TATGGCCCGC CGCGCGCGTT GGAGGCACAG GAATCTGGGG ACGTCCCCCA CTCCGGCCAC
CCCTAA
 
Protein sequence
MHHICKTAVL PYSAAQIFAL IEDIRAYPQF LPWCGRTRII QSKEDEVVAE ITISHGAFGK 
SFTTKNRYQR PKMAEVRLVN GPFRFLEGLW QLELDARGTK VTLDMRFEFA SRLLGAFLEP
IFKQAAETMV QRFAQRARAV YGPPRALEAQ ESGDVPHSGH P