| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0453 |
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| Symbol | |
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| ID | 6876405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 426727 |
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| End bp | 428397 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642788326 |
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| Product | glycosyl transferase family 39 |
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| Protein accession | YP_002218914 |
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| Protein GI | 198282593 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000363312 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGAAC GGCGTCAAGG GACTTTTCTC TTTCAGGCGC TGATTCTGTT CCTTTTTGCC
TTCTGGCTGT TGGCCTTTCA TACCGGAAAT TCCAGCCTCT GGGACATCGA TGAGCCCAAT
AATGCCCAGG CTCTGAAAGA AATGATGGTG CATCACAACC TGGTGGTCCC CACATTCAAC
GCAGCACTGC GTCCCGACAA GCCCATCCTC AATTACTGGT TGATGTGGGC CGGGGTACAC
GTGCTGGGAA TGAACAGTTG GGGCCTGCGT ATCGGCTCGG TGGCCATGGG GGCGCTGCTG
GTATTCTATC TGGCGCTGGC CTTGCGTCGC CCCTATGGGG AGCAGACTGC GCTGCTGGCC
GGACTACTGG CTGCCACAGC CCTCCATAGC CAGATCATCT TCCGGGCCGC AGTGCCGGAT
CCTCTGTTGA TTCTCTTTGT CACTATCGCA CTGGTTTCCT ACCTGCGGGG TTATCTTTAC
CCGGAAAAAG CGGAGCGCGA CTATCTGATC GCCTACGCAG CGATGGGGTT GGCGACCCTG
GCCAAAGGCC CCATAGGCTT CCTCCTGCCC GGCCTTGTCA TTGTGGTTTT CCTGCTGCTG
CGCCGGGAGC TGCCGGATCT TTGGCGCCGC GGCCGCCTGG CGTGGGGTAT ACCACTGTTT
TTGGTCGTCA CCCTGCCCTG GTATCTGGCG GTGGGTATGG AGACCCATTG GGCCTGGGAT
CGCCTGTTCA TTGATCAGCA GAACATCGAT CGCTACGCCG CCGCCATGCA GGGGCATTGG
GGTCCGATTT ACTATTATCT TTTCACCATG GCGTTGGCGC TGCTGCCCTG GACGATTTTT
CTGCCGCAGA CCATTGCGGA AATCTGGCAG CGACGGACCA CGCTGCTGCA ACAGGCACCC
GCTGATACCT TCATGCTGGT CTGGGTCGTT GTCTGGGTTG CCTTTTTCAG CCTCGGCGCC
ACCAAGCTCC CCAATTACGT CTGGGAGGCC TACCCCCCCC TCTTTGTCCT CATTGCGGCG
CGCCTTTACC GGGCGTTGAA CGGGACGGAG CCCCTCGGTC GCCGCGGTGT CATCCTGTCC
CTCGTGGCTT TATTGCTGGT GGGCTTCGTC CTGACGGCCC TGGGGGCCTG GCTGGTACCG
GAAAAAATTC CGCCCCTGGG CGGCATGGCC TATCTGGGCC TGCCCTATAT CGCCGCGGCA
ATGCTCGGCC TGTTTTTCGC TTGGCGAGGC CTGCTGCTGC CGGTCATCAG CAGTCTCGGA
GCAGGCGCGG TAGCCCTCAC AGCCTGCCTG GTATTGCTGG CCATGCCCGC CCTGGATGCC
TTGAAACCCT CGGTGACCAT GGGCCGCATG ATCCGCGCCA GTGTGGGCGC ACGGCCCTAC
GCCATCGCGA CCTGGCAGTG GTTTGAGCCC AGTTTTCTCT TTTATGCCGG GCGTGGCGCC
ATGCGCGTGC ATCAGTTGAA AAACCCGCAG GAGATCCGGC GCGTCGTTGC CGATGGCCAC
GGCACCGCCT ATCTCGCCCT GCCGACCCGC GATGTACCGG CCCTGCGGAC AGGCCTACCC
GGAGCGTTGC ATGTACAGGA ACTCTACTCG GGTTATGAAC TCTATAGCCG GCAGCATATC
GCCCTGTTGC GCATCGAGTC CCCCATATCT CTGGAGAAAA ACGGATCATG A
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| Protein sequence | MSERRQGTFL FQALILFLFA FWLLAFHTGN SSLWDIDEPN NAQALKEMMV HHNLVVPTFN
AALRPDKPIL NYWLMWAGVH VLGMNSWGLR IGSVAMGALL VFYLALALRR PYGEQTALLA
GLLAATALHS QIIFRAAVPD PLLILFVTIA LVSYLRGYLY PEKAERDYLI AYAAMGLATL
AKGPIGFLLP GLVIVVFLLL RRELPDLWRR GRLAWGIPLF LVVTLPWYLA VGMETHWAWD
RLFIDQQNID RYAAAMQGHW GPIYYYLFTM ALALLPWTIF LPQTIAEIWQ RRTTLLQQAP
ADTFMLVWVV VWVAFFSLGA TKLPNYVWEA YPPLFVLIAA RLYRALNGTE PLGRRGVILS
LVALLLVGFV LTALGAWLVP EKIPPLGGMA YLGLPYIAAA MLGLFFAWRG LLLPVISSLG
AGAVALTACL VLLAMPALDA LKPSVTMGRM IRASVGARPY AIATWQWFEP SFLFYAGRGA
MRVHQLKNPQ EIRRVVADGH GTAYLALPTR DVPALRTGLP GALHVQELYS GYELYSRQHI
ALLRIESPIS LEKNGS
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