Gene Lferr_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0449 
Symbol 
ID6876401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp423949 
End bp424446 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content65% 
IMG OID642788322 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_002218910 
Protein GI198282589 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000279519 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACAAT CGGTAGTGGG TGTGGTGATG GGCAGCGAAA GTGACTGGGA AGTGATGCGT 
GCCGCGGTGG AACATCTGCA GGCGTTGGCC ATTCCCTGCG AACAGCGTGT CGTATCCGCA
CACCGCACGC CGGACCTCCT TTTTGACTAT GCGGCTGGTG CCGCGCCACG GGGGCTGCGA
TGTATCATTG CCGGCGCTGG CGGCGCTGCG CACCTGCCCG GCATGCTGGC GGCCAAGACC
ATCGTGCCGG TGCTGGGCGT GCCGGTGCCC TCCCGGCATC TGCAAGGCCT GGATTCTCTA
TTGTCTATCG TGCAGATGCC AAAGGGGGTG CCGGTGGCCA CCTTTGCCAT CGGCGCAGCG
GGTGCTGCCA ATGCTGCCCT CTTTGCTGCC GCGATGCTGG CTGGTGCCGA TGCGGCGCTG
GCCCGGCGCC TGTTGGATTT TCGCGCGCGC CAAGAGACTG CAGTGATGGC CATGACCTTG
CCGGAGACCG GCCTTTGA
 
Protein sequence
MEQSVVGVVM GSESDWEVMR AAVEHLQALA IPCEQRVVSA HRTPDLLFDY AAGAAPRGLR 
CIIAGAGGAA HLPGMLAAKT IVPVLGVPVP SRHLQGLDSL LSIVQMPKGV PVATFAIGAA
GAANAALFAA AMLAGADAAL ARRLLDFRAR QETAVMAMTL PETGL