| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0442 |
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| Symbol | |
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| ID | 6876394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 417465 |
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| End bp | 418595 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642788315 |
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| Product | twitching motility protein |
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| Protein accession | YP_002218903 |
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| Protein GI | 198282582 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000650677 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGTGC TGGATGACCT GCTGGTCCTG ATGGTGGAAA AAAACGGCTC GGATCTGTAC
CTCACCGTGG GCTCGCCACC GGTCATGAAA GTCGACGGAC GGACGGTTCC GCTGGGGACA
GAAATGCTGA AACCGGGTCA GGTGCTGAAT CTGGCCAAGG AAATTCTGGG GATGGAGCGC
TTGCAGGAGT TCCAGCACGA GAAAGAAATC AACATGGCCA TTTCCGTGCC CGGGGTGGGG
CGTTTCCGGG TCAACGGGTT TTTCCAGCGT GGTGAACTGA GCTTTGTCCT GCGCGCCATC
AAGACCCAGA TTCCCAGCCT GGAGCAGCTC AGGCTGCCGC CGATACTGAA AGATCTGGCC
ATGACGTCGC GGGGGCTGGT GCTCTTCGTC GGTTCTACCG GTTCCGGGAA AAGCACCTCT
CTGGCGTCGA TGGTCCAGTA TCGCAACCAG AACGCGGCGG GTCATATCCT CACCATCGAG
GATCCGATCG AATTTCTGCA CCGGAATGCG AAGTCCATCG TCAATCAGCG CGAAGTGGGC
ATCGATACCC TGAATTATGA GCGGGCGTTG GAGAATGCAT TGCGGGAAGC ACCGGATGTC
ATCCTGATCG GCGAAGTGCG CAGCCGGGAC ACCATGGATC ATGCCATCGC TTATGCCGAA
ACTGGGCACC TGTGTATGTC CACCCTCCAT GCGAACAATG CCAATCAGGC CATTGAACGG
ATCATCAATT TTTTCCCGGA AGACCGTAAA AAACAGTTGC TGATGGACCT TTCGCTCAAT
TTGCGCGCCG TGGTCTCACA GCGCCTGTTG CCGGTCAAGG GGCAGAGCGG ACGAATCGCT
GCAATGGAGG TGCTGATCAA CACTCCGGCC ATTGCCGATC TGATCTACAA GGGTGAAGTG
GGCCTGCTGA AGGACGCCAT GTCGCGAACG AACGACGTCG GTATGCAGAC GTTTGATCAG
AGCCTGTTGC AGTTGTTTAT GGATGGACTG GTGGAATATG ACGATGCCCT GCGCGCGGCC
GATTCGCAGA ACGATCTGCG CCTCGCCATC AAACAGGCGT GTATGCGTTC GGGCATGGCA
GATCCCGGGG CCGCCACCTC TGCGGAAGGG CAGTGGCGTA TTCAGTCTTG A
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| Protein sequence | MSVLDDLLVL MVEKNGSDLY LTVGSPPVMK VDGRTVPLGT EMLKPGQVLN LAKEILGMER
LQEFQHEKEI NMAISVPGVG RFRVNGFFQR GELSFVLRAI KTQIPSLEQL RLPPILKDLA
MTSRGLVLFV GSTGSGKSTS LASMVQYRNQ NAAGHILTIE DPIEFLHRNA KSIVNQREVG
IDTLNYERAL ENALREAPDV ILIGEVRSRD TMDHAIAYAE TGHLCMSTLH ANNANQAIER
IINFFPEDRK KQLLMDLSLN LRAVVSQRLL PVKGQSGRIA AMEVLINTPA IADLIYKGEV
GLLKDAMSRT NDVGMQTFDQ SLLQLFMDGL VEYDDALRAA DSQNDLRLAI KQACMRSGMA
DPGAATSAEG QWRIQS
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