| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0439 |
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| Symbol | |
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| ID | 6876391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 414812 |
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| End bp | 415639 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642788312 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_002218900 |
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| Protein GI | 198282579 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000148938 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATACCCC AGAATATTGT CTTCATTGGT GCCGGCAATA TGGCTCGCGC CCTCATCGCC
GGTCTGCGAC GTCAGGGCAT TGCAGGCGAG CAGATTCAGG TTCATGCCCC CAGCAGTGCA
CACCGTGACG CACTTGCCGA AGAGTTCGGC ATCCGCAGTC TGGCGGCAAC GGCTCAAAGT
CTGCCTGCCA ACAGCGTGGT CATCTACGCA GCCAAACCAA AGCAGATATC CGCGGTGCTT
GCGCTGTGGC GACAGGCCTT CGCCGATGCC GGGGTGCTCT TCCTCTCTGT GGCTGCCGGC
ATCGACAGCG CACGCATTGC CGCCGAACTG AACCCCGGGA GCGCCATCGT GCGCGGTATG
CCCAACACCC CGGCACAAGT CGGTGCCGGA GCGACGGCCC TGTATGCCCG CGATTCGGTG
AGCGCCGCGC AACGCCAGAC TGCCGGGTTT ATCATGTCCG CCGTGGGCGA GATTTACTGG
CTGAGCGATG AATCGCTGAT GGACGCTGTT ACGGCACTAT CCGGAAGCGG CCCTGCCTAT
GTCCTGCTGT TCCTGGAAGC CCTTGAAGAT GCCGCCGTGC TGCAGGGCCT GGACCGTGCC
ACTGCGCGCG CCCTCGCCCT GCAGACGGTG CTCGGCACCG CACAGATGGC GGCCGCCAGC
ACCCTCAGTC CGACCGCGTT ACGCCATCAG GTCACCAGTC CGGGTGGCAC CACGGCGGCG
GGTTTGGCGG TCTGGGAAGA GCACCTGCGG CCACTGGCGC AGCGGGCCCT GGCCGCCGCG
GCGGAGCGCA GCCGCGCTCT GGGCAGCCCG GAAAAGGATA TACCATGA
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| Protein sequence | MIPQNIVFIG AGNMARALIA GLRRQGIAGE QIQVHAPSSA HRDALAEEFG IRSLAATAQS
LPANSVVIYA AKPKQISAVL ALWRQAFADA GVLFLSVAAG IDSARIAAEL NPGSAIVRGM
PNTPAQVGAG ATALYARDSV SAAQRQTAGF IMSAVGEIYW LSDESLMDAV TALSGSGPAY
VLLFLEALED AAVLQGLDRA TARALALQTV LGTAQMAAAS TLSPTALRHQ VTSPGGTTAA
GLAVWEEHLR PLAQRALAAA AERSRALGSP EKDIP
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