Gene Lferr_0437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0437 
Symbol 
ID6876389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp414162 
End bp414512 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content60% 
IMG OID642788310 
Productprotein of unknown function DUF167 
Protein accessionYP_002218898 
Protein GI198282577 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00251] conserved hypothetical protein TIGR00251 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000262204 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCTCCT CAGAAACACG CCCCCCATAT CTGCGGGCAG ACGGTGACGA CCTGTATGTA 
CGCATCCATG TACAGCCGGG TGCCAAGACC GATGCCATCG GCGGATGCCA CGGCGATGCC
CTCAAAATTC GCCTGCGTGC CCGGCCCGTG GATGGCGCTG CCAATGCTGC CCTTTCGGCT
TTGCTCTGTG CTACCCTGCG CCTGAAAAGA CAGCAGATCA CTTTGGTGCA GGGGGAGAGC
GCGCGGGACA AAGTGCTCAG GATTAGCGCA GCGTCCACAC ACGTTCAGAC TCAACTCGCA
AAATATGCCG AATCCGCCCA CTCACCTGCT CTCGACAGGG AAGACCGATG A
 
Protein sequence
MTSSETRPPY LRADGDDLYV RIHVQPGAKT DAIGGCHGDA LKIRLRARPV DGAANAALSA 
LLCATLRLKR QQITLVQGES ARDKVLRISA ASTHVQTQLA KYAESAHSPA LDREDR