| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0423 |
|---|
| Symbol | |
|---|
| ID | 6876375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 402942 |
|---|
| End bp | 403838 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642788296 |
|---|
| Product | peptidase M48 Ste24p |
|---|
| Protein accession | YP_002218884 |
|---|
| Protein GI | 198282563 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.666925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00000193107 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAT TCAAGAGCAT ACTGCTGTTG GTGGTGACGA ATCTGCTGAT ATTCGTCAGC
CTGTCGATCA GTTTTACTAT TCTGGTCAAC TTCATTTTGC CGATCTTCGG TGTCGACCTC
CGCGGGTCGG TGAGTGGCGC GGACCTGCTC TGGGCGCTGC TGATCGGTTT TGGCGGCGCC
TTTATTTCGC TACTGATGTC GAAACATCTG GCGCGCGCGG GCCTGCAGAT GCAACGCATC
GATGCGCCGC AATCGGCCAA GGAACATCTG GTATACGATT CAGTGGCGCA GCTCGCCAAT
CGTTTGGGTA TTCGCATGCC GGAAGTCTGG GTGTACTGGA ATGATGAGCC TAACGCCTTC
GCCACCGGAC CGGGGCGCAA CCACAGCATG GTGGCGGTCA GCAGCGGCCT GGTCAATCTC
CTCAGCGACA ATGAGGTGCG GGCGGTACTG GCCCATGAGA TGGGGCACGT ATACAATGGC
GACATGGTGA GTACCACCTT GCTGCAGGGG CTGATGAATA CGTTTGTATT CTGGTTGTCC
ATGCTCGCCG CGCGGCAGTT TGATGACCGG CCCATGGTTG CTTTTGCGGT ATCCATAGTG
CTGCAGATCG GCCTGTCTTT CCTGGCGCTG ATTCCCATCA CTTGGTTTTC GCGCCGTCGG
GAGTTCGCGG CGGATCGTTT TGCCGCCGAG CAGGTAGGCG TGGCTCCGAT GATCTCGGCC
CTGCAAAAAC TGCAGCGGGG CGCGGAAGCC CTGCATGTGG TGCATGATGT GGTGCGCGAT
CCCATGGCGA CGGCCTACAT TTCCGGAAGC TGGCGCGGTT GGTTTGCCAC CCATCCCAGT
CTGGAGGCGC GGGTGGCAGC TCTGCGGGCG TTGCAAAACG GTTATAGTTA CCAGTAG
|
|---|
| Protein sequence | MKSFKSILLL VVTNLLIFVS LSISFTILVN FILPIFGVDL RGSVSGADLL WALLIGFGGA
FISLLMSKHL ARAGLQMQRI DAPQSAKEHL VYDSVAQLAN RLGIRMPEVW VYWNDEPNAF
ATGPGRNHSM VAVSSGLVNL LSDNEVRAVL AHEMGHVYNG DMVSTTLLQG LMNTFVFWLS
MLAARQFDDR PMVAFAVSIV LQIGLSFLAL IPITWFSRRR EFAADRFAAE QVGVAPMISA
LQKLQRGAEA LHVVHDVVRD PMATAYISGS WRGWFATHPS LEARVAALRA LQNGYSYQ
|
|---|
| |