Gene Lferr_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0414 
Symbol 
ID6876366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp393656 
End bp394564 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content65% 
IMG OID642788287 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_002218875 
Protein GI198282554 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000122761 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACAGAGG TGCAGGGTAG CCTGAAGCAA AAAGCGGTGG CCACGCTGGC AGCGGGCATT 
CTGCGCGGGG CGGGTTACCT GCCGCAGCGC TGGCGTGCAG CCCTCGGTGC AATGCTCGGT
GATTTGGTGC GGCTCAGTAT GAGCCGGGCG CGCAAAGTGG TGGACACCAA CCTCGCCATT
GCTTTCCCCA TGATGAGTCT GGCCCAGCGG CATACTCTGC GGCGCGCGCA TTTCCGGGCA
CTGGGCCAGG CGGCCCTGGA GTTGGGACCA CTGTGGTACT GGCCCTTGCC CCGCGCCCTC
GGCCTGATCC GCGAAGTGCG TGGGGACGAT CTGGTGGACG CCGCTCTAGC CAAAGGACAT
GGGGTGATTC TCTTCACCGC GCACCTCGGG GCCTGGGAAG CCGCGGTGCT CTACATCGGG
CAGCGCTGGC CGGTAACCGT ACTCTACATG GAGACCCGCA ACCCGGCTGT CAACACACGC
ATTGTGGCCG GGCGCGGGCG CAGTGGTGCG CAATTGGTCC CCAAGGAGGG AGGTATCCGC
CCCCTGCTCC ACGCGCTGCA TCAGGGCAGG GCCATCGGTA TACTTCCGGA TCAGAACGTC
GATCCGCGCG AAGGGGATTA TGCCCCGTTC TTCGGCCGTC CTGCCTGCAC GACACCTTTG
CTGGGCCGGC TGGCGGCGCG GCGCGGGAGC CCGGTGTTCG GACTCTTCGC CTATCGGCTG
CCGGGTGGTG AGGGTTTTCA TATCGAGATT GTGCCCATGC CGGAATCCTT CCCGAGCGGG
GATGCCACAG CCGATGCCAC GGCGATGAAT GCGGCACTGG AGACTGCCAT CCGTAAAGCC
CCTGAACAGT ATTGGTGGGT TCACCGTCGT TTCAAGGATC AGCCGGAAGG CTGGGACTAT
CCCTATTAA
 
Protein sequence
MTEVQGSLKQ KAVATLAAGI LRGAGYLPQR WRAALGAMLG DLVRLSMSRA RKVVDTNLAI 
AFPMMSLAQR HTLRRAHFRA LGQAALELGP LWYWPLPRAL GLIREVRGDD LVDAALAKGH
GVILFTAHLG AWEAAVLYIG QRWPVTVLYM ETRNPAVNTR IVAGRGRSGA QLVPKEGGIR
PLLHALHQGR AIGILPDQNV DPREGDYAPF FGRPACTTPL LGRLAARRGS PVFGLFAYRL
PGGEGFHIEI VPMPESFPSG DATADATAMN AALETAIRKA PEQYWWVHRR FKDQPEGWDY
PY