Gene Lferr_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0410 
Symbol 
ID6876362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp389898 
End bp390671 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content56% 
IMG OID642788283 
Productglycosyl transferase family 2 
Protein accessionYP_002218871 
Protein GI198282550 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.562142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000988056 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCCGTGG CGGCTAGTGC TCTATCAGTC ATTTATATTA CCAGAGATGC CGGGCGGTTG 
CTGCGTGCAT CGCTGGGCAG CGTAGCGCCG TTAGGTGCAG AAATTGTTCT GGTAGATAGT
GGTTCTACGG ATGATACGCT GGCCATCGCA ACGGAAATGG GTGTAAAGAT CATTCACAGG
CCCTGGCCCG GCTTTGGTGC GCAGCGGCAG TTTGCCGTGG AGTCGGCGGA AAATGACTGG
ATACTGATGT TGGACGCGGA TGAAATTTTG CGCGATCAGG CGCGTTCTGC CATTGTGGAT
GTGGTGCGGA ATAGCGACCC TCATGTTGCT TATGCGCTAA GGCGTTATAA TTACCTTCAC
GGCAAGGCCA TACGCCACGG AGACTGGAGC CGGGATTATG TGGTGCGGCT TTTTAACCGA
CGCTATGGGC ACTATCGTCC CGAGGATACG GTGCATGAAA GCTGGCATGG TCAGGGGGAG
ACGCGGCGTA TGCAGGGATA TATCCTGGAC CATCATTCTT TTCCCAGCTA TGCGGATATG
CTGGATAAAC TGCGCCTTTA CGCCATCCTC AATGCCCAGC AGGTCCACCA GCACGGCAAA
ATGCTCCATG CTTACATGCC CATGACCCAC GCGCTGGCGG CTTTTTGGCG CGGCTATTTC
TGGCGCTTGG GATTTCTGGA TGGTGTGGAG GGTGCCGCCA TCGCGTGGAC TACGGCACTG
GGGGCATTCA TGAAATATGC CATGGCGCTG GAACTCAGAG ACCATAGTCA GTGA
 
Protein sequence
MAVAASALSV IYITRDAGRL LRASLGSVAP LGAEIVLVDS GSTDDTLAIA TEMGVKIIHR 
PWPGFGAQRQ FAVESAENDW ILMLDADEIL RDQARSAIVD VVRNSDPHVA YALRRYNYLH
GKAIRHGDWS RDYVVRLFNR RYGHYRPEDT VHESWHGQGE TRRMQGYILD HHSFPSYADM
LDKLRLYAIL NAQQVHQHGK MLHAYMPMTH ALAAFWRGYF WRLGFLDGVE GAAIAWTTAL
GAFMKYAMAL ELRDHSQ