Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0410 |
Symbol | |
ID | 6876362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 389898 |
End bp | 390671 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642788283 |
Product | glycosyl transferase family 2 |
Protein accession | YP_002218871 |
Protein GI | 198282550 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.562142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000988056 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCCGTGG CGGCTAGTGC TCTATCAGTC ATTTATATTA CCAGAGATGC CGGGCGGTTG CTGCGTGCAT CGCTGGGCAG CGTAGCGCCG TTAGGTGCAG AAATTGTTCT GGTAGATAGT GGTTCTACGG ATGATACGCT GGCCATCGCA ACGGAAATGG GTGTAAAGAT CATTCACAGG CCCTGGCCCG GCTTTGGTGC GCAGCGGCAG TTTGCCGTGG AGTCGGCGGA AAATGACTGG ATACTGATGT TGGACGCGGA TGAAATTTTG CGCGATCAGG CGCGTTCTGC CATTGTGGAT GTGGTGCGGA ATAGCGACCC TCATGTTGCT TATGCGCTAA GGCGTTATAA TTACCTTCAC GGCAAGGCCA TACGCCACGG AGACTGGAGC CGGGATTATG TGGTGCGGCT TTTTAACCGA CGCTATGGGC ACTATCGTCC CGAGGATACG GTGCATGAAA GCTGGCATGG TCAGGGGGAG ACGCGGCGTA TGCAGGGATA TATCCTGGAC CATCATTCTT TTCCCAGCTA TGCGGATATG CTGGATAAAC TGCGCCTTTA CGCCATCCTC AATGCCCAGC AGGTCCACCA GCACGGCAAA ATGCTCCATG CTTACATGCC CATGACCCAC GCGCTGGCGG CTTTTTGGCG CGGCTATTTC TGGCGCTTGG GATTTCTGGA TGGTGTGGAG GGTGCCGCCA TCGCGTGGAC TACGGCACTG GGGGCATTCA TGAAATATGC CATGGCGCTG GAACTCAGAG ACCATAGTCA GTGA
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Protein sequence | MAVAASALSV IYITRDAGRL LRASLGSVAP LGAEIVLVDS GSTDDTLAIA TEMGVKIIHR PWPGFGAQRQ FAVESAENDW ILMLDADEIL RDQARSAIVD VVRNSDPHVA YALRRYNYLH GKAIRHGDWS RDYVVRLFNR RYGHYRPEDT VHESWHGQGE TRRMQGYILD HHSFPSYADM LDKLRLYAIL NAQQVHQHGK MLHAYMPMTH ALAAFWRGYF WRLGFLDGVE GAAIAWTTAL GAFMKYAMAL ELRDHSQ
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