Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0408 |
Symbol | |
ID | 6876360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 387654 |
End bp | 388877 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642788281 |
Product | O-antigen polymerase |
Protein accession | YP_002218869 |
Protein GI | 198282548 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00264178 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGCAC TTTTACAAAA AACCATGTTC CTGTTTTTTT GTCTGCCGAT TTTTTTCTTT CCGTTAAGTA CCGCGGCAGC GGGTATTAGT GGCGGTATCT TCGTACTGCT ATATATCATG AGCGGGTACT GGAAAAACTT GGGGCAGATA CCGACGCGCC CATGGTTCAT ACCGCTGACC CTGTTGATAT TATGGACGTT GCTAGGCACC ATTTGGAGCA GAGCGAACCC TCACGATACC TGGATAGCCA TAAGTCGACT CGGATATTTC TTTTTTGCGT ACGCAGGAAC AACACTGCCT TGGAACAGAA GCAGGTTCCG GATGATTCCG GGTTTATTTC TGGCGGGATT GATATTGAAC TGGATAGTCG GCCTATGTCA GTGGCTTGGA ATATGGAAAT GGAGTCCGTT GATTCCGAGG CTTGGCCCTG TCGGTTATGC CAATCATATT TTTCTCAGCA TGACGCTGAC CATGGCATTG CTATGGATAG CCTACGATAT GCGGGATAGG GTTTTGTTAC CGAGATGGGC AAACGCAATT CTCGCGGTAG CCTTCCTGCT GCAATTGGGC ATGGGTGCCG GACGTACTGG TCAGTTGCTT TTCGTCATCC TCATGCCGCT TGCGGTATGG GTGTTATTCA GGGGGCAGTG GCGTTATTGG GCGTTGGGAG GTATTGCGCT GACAATAATT GGGATGGGAA TGTCTCCCAT TGTTCAACAT CGAGTGCAAG AAGGATTGCA AAATTTACAA GTTGTCAGCA AGGGTGATTA CGATACCAGT TGGGGACTGC GTGTTTTGAT GGCCCAGGGC GCACTGTACA TGGGTTTCCA GCATCCTATC CTGGGGGTTG GTACAGGCAA TTACGCAAAC GAGATGGCAC AATTACAGAA AAATCATATT CTACCTGAGC TGCCATCTCC GTTGATCATG AGCCAGCCTC AAAACAGTTA TCTCCTTGAA CTGGCCATGC TAGGCATTCC CGGTCTGTTG CTGCTAGTGT GGTTCTTGTG GGCTGTAACG GCACCAGCAT GGCGACTGAA GGCGGTTCCC GAAGGCTGGT TTGTTTTAAT TTATATGGCG GTATTTATAG CTGGTAGTTT TTCTGACACA TTGATTTGGG GGTATGCCAA TGTGTTCTCG CTGGCGATAC TGACCGCCTT GCCAATCCCC CTTGCCCAGG ATGGCTTACA TGGCGCGACT ACCACTGACA ATCGCTTCGC GTAG
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Protein sequence | MKALLQKTMF LFFCLPIFFF PLSTAAAGIS GGIFVLLYIM SGYWKNLGQI PTRPWFIPLT LLILWTLLGT IWSRANPHDT WIAISRLGYF FFAYAGTTLP WNRSRFRMIP GLFLAGLILN WIVGLCQWLG IWKWSPLIPR LGPVGYANHI FLSMTLTMAL LWIAYDMRDR VLLPRWANAI LAVAFLLQLG MGAGRTGQLL FVILMPLAVW VLFRGQWRYW ALGGIALTII GMGMSPIVQH RVQEGLQNLQ VVSKGDYDTS WGLRVLMAQG ALYMGFQHPI LGVGTGNYAN EMAQLQKNHI LPELPSPLIM SQPQNSYLLE LAMLGIPGLL LLVWFLWAVT APAWRLKAVP EGWFVLIYMA VFIAGSFSDT LIWGYANVFS LAILTALPIP LAQDGLHGAT TTDNRFA
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