| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0405 |
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| Symbol | |
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| ID | 6876357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 384138 |
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| End bp | 384854 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642788278 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_002218866 |
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| Protein GI | 198282545 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0189593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCCGG TTCCCATTCT GATGTACCAC AACATAGCGG TGGCCCCGAA AGGGGTTGGG
CTGCGTGGCC TCTATGTTTC GCCTCGGCGC TTTGCGCGGC AGATGGCGCT GCTGCACTGG
TTGGGTTACC GCGGTTTGTC CATGTCCGCG GCGTTGCCCT ATCTGCGTGG TGAGCGCGAG
GGCAAGGTAG CGGTGATTAC TCTGGACGAC GGTTATCGGG ATAACTTCGA ATGCGCGTTG
CCGGTGCTGC TGCACTACGG GTATACCGCC ACTTGCTACG TGGTGAGTGC CGCCATCGGT
ACCGACAATC ATTGGGATGC GCAGCAGCTT GGTACACATA AGCCACTGAT GAACCTGAAT
GAATTATGCC GATGGCGGGA TGCCGGGATG GAGGTCGGGG CGCACAGCCG CCATCATCCC
CATTTGCCGG AACTGAGTGA GCCCGAATTG GACGACGAGG TGGCAGGATC CAAGCGCGAG
CTGGAAGGGC TTTTGGCGGT GCCGGTGACC CAGTTCTGTT ATCCCTACGG TGCGGCGGGG
CCGCGCGAGC AGGAGGCGGT CCGGCGCGCC GGCTTTGCCG CCGCGGTGAC CGTGCGGCGG
GGTCGCGCCC GGCCCGGTGG GGATCTCTTC GGCTTGCCAC GGGTGATGGT CGGCGGACAC
CACGCGCCGC ATGTGTTTCC CCTGCAACTG CTGACCACGC ATGAGGACCA CCATTGA
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| Protein sequence | MKPVPILMYH NIAVAPKGVG LRGLYVSPRR FARQMALLHW LGYRGLSMSA ALPYLRGERE
GKVAVITLDD GYRDNFECAL PVLLHYGYTA TCYVVSAAIG TDNHWDAQQL GTHKPLMNLN
ELCRWRDAGM EVGAHSRHHP HLPELSEPEL DDEVAGSKRE LEGLLAVPVT QFCYPYGAAG
PREQEAVRRA GFAAAVTVRR GRARPGGDLF GLPRVMVGGH HAPHVFPLQL LTTHEDHH
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