| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0401 |
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| Symbol | |
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| ID | 6876353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 378209 |
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| End bp | 380953 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642788274 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_002218862 |
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| Protein GI | 198282541 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0753123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGGAA CTATCATCCG CCATGTCGTC GGCAGCCGCA ATGACCGACT GATCAAGAAG
GCCCGTGCCA TTGTAGCGCA GGTCAACGCC CTGGAAGACC GCTTCAAGGC CATGGACGAC
GCGACCCTTG CTGCACAGAC CGCGATCTTC CGGGAACGGC TGGCCCGTGG TGAACCCCTC
GATGCCCTGT TGCCGGAGGC GTTCGCCGTG GTGCGTGAGG TGAGCCGGCG GGTAATGGGC
ATGCGCCAGT ACGATGTGCA GATCATCGGT GGTTTCATGC TCCATGAAGG TAAAATTGCC
GAGATGCGCA CTGGCGAGGG CAAGACCCTC GTTGCGACCT TGCCGGCCTA CCTCAACGCC
CTGCAGGGTA AGGGTGTGCA TGTGGTGACC GTCAATGACT ATCTGGCCAG CCGCGATGCC
GAGTGGGTCG GCAAGATTCA CCGTTTTCTG GGCCTGAGCG TAGGTACCAT CATCTCGGAT
CTGTCCAGTG AGGAGCGCCG CGCCGCCTAT GCGGCCGACA TCACCTACGG CACCAATAAC
GAGTTCGGTT TCGATTATCT GCGGGATAAC ATGGCGTTTT CTCCGGCCGA TCGGGTGCAG
CGCGGCCTGC ACTACGCCAT CATCGACGAA GTGGATTCCA TCCTGATCGA CGAGGCGCGT
ACCCCGCTCA TCATCAGTGG TCCCACCGAG GAAAATACCG ACCTTTACTA CCGGGTGGAC
AAACTCGTCG GGAGTTTTGT CGTCGATGAG GACTATACGG TCGATGAAAA GGCCCGGCAG
GTCATGCTTA CGGAGGAGGG GATCGAAAAG GCGGAACGCC TGATGGCGGA GAGCGGTCTG
CTGGTCGACG GCGACCTCTA CGATCTGGCC AACGTCACCC TGGTCCATCA CCTCAACCAG
GCGTTGCGGG CCCATGTGAT CTACCGGCGG GAGACGGATT ATATCGTTCG CGACGGAGAG
GTCTGTATCG TCGACGAATT CACCGGACGC ATGATGTCCG GGCGGCGCTG GTCTGATGGC
CTGCATCAGG CGGTGGAAGC CAAGGAAGGG GTGGCGGTCC AGAATGAGAA CCAGACCCTG
GCCTCCATCA CCTTTCAGAA TTATTTCCGC ATGTACGAAA AGCTGTCGGG CATGACCGGG
ACTGCTGACA CAGAAGCCTT TGAACTGAAT CAGATTTACG GTCTGGAAGT GGTGATCATA
CCGACGCACA GGCCGGTGTG CCGGACGGAT TTCGCCGATC TTATCTACCG GACCAGTCAG
GAGAAATGGA AAGCGATAGT GGAAGACATC CGCGGCTGTC AACAGCGCGG GCAGCCGGTA
CTGGTGGGTA CCACCTCTAT CGAACACAAC GAGTTTCTGT CTCATCTGCT CAAGCAGGCG
CGGATTTCCC ATGAAGTGCT GAACGCCAAA CAGCATCAGC GCGAGGCGGA GATCATTGCC
CAGGCGGGCA CGCCGGGGGC GGTGACCATC GCCACCAACA TGGCGGGACG GGGTACCGAC
ATCGTGCTGG GCGGCAATGT CGGCCATCAG GTGGATATGG TGCTGGCCAA TCCGGATCTG
GAAGAGGAGG AAAAAACCCG GCGGATCGAG TCTCTCAAGA GCGGTTGGCA GGGACTGCAT
GACGCGGCGA TAGCGGCGGG CGGATTGCAT ATCATCGGTA CCGAACGTCA TGAATCGCGG
CGGATAGACA ACCAGTTGCG CGGGCGGTCC GGCCGCCAGG GCGACCCCGG CACCACCCGT
TTCTACCTTT CCCTGGATGA CCCCCTGATG CGCATTTTCG GCAGCGATCG TCTGAGTGGC
CTGATGCAGA AGCTGGGCAT GAAGGAGGGG GAGGCGATCG AGCATCCCTG GGTGACCAAG
TCCATCGAGA ATGCCCAGCG CAAGGTGGAA AGCCGCAACT TCGATATCCG CAAACAATTG
CTGGAATACG ACGACGTGGC CAACGAGCAG CGCCGGATCA TCTATCAGCA GCGCAACGCC
TTCATGGATG CCGATGATGT CAGTGCGGAA ATCAGGGCGT TGCGCGACGA TGTTCTGGAC
GCAGTGCTGG CCGCCACGGC GCCTGAAGGC GTTATGGAAG AGCGCTGGGA TCTGCCAGGT
CTGGAAGCGG CACTGGACCG GATTTTTGGC CTGCAGGTCC CGGTCGGGCA ATGGCTGGAG
CAGGATAAAG GGCTCACTCA CGCGGCGCTA CGTGAGCGGA TCATGGAGAT GGTGTTGTCC
GCTTACGCGG CCAAGGAGTC TCTCATGGGC AGCGAGATGA CCCGCCACTT CGAAAAGTCC
ATCCTGCTGC AGGTCCTGGA CAGCCAGTGG AAGGACCATC TGGCGAGCAT GGATCATCTC
CGCGAAGGCA TTCACCTGCG TGGATATGCC CAGAAGAATC CCAAACAGGA GTACAAGCGG
GAGTCTCTGA TCATGTTCAA CGCCATGCTG GATCAGTTGC GCGAAGAAGT GGTCAGCACC
CTCTCGCGCC TGCATGTGAG TCCGGCTCCG GCGGAGCCGC TGGATTGGGA CGCCATCGCC
CGTGCCGCCC AGCCTCGACA TTTGCAGTTT TCCCATCCGG ATTTTGCAGC GGCGGCGGCA
CCGCTTGTCG AGGATGCCGG CCTCGCACTG ACAGGGCTGG GCGTCATTGG TGAACAGGAG
GCCGGTCACA GCCCCGCGAT CAGTGACGAC AAGGTGGGAC GGAATCAGCC GTGCCCTTGC
GGTTCCGGCA AAAAGTACAA GCATTGTCAC GGGCGCCTGC AATAA
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| Protein sequence | MFGTIIRHVV GSRNDRLIKK ARAIVAQVNA LEDRFKAMDD ATLAAQTAIF RERLARGEPL
DALLPEAFAV VREVSRRVMG MRQYDVQIIG GFMLHEGKIA EMRTGEGKTL VATLPAYLNA
LQGKGVHVVT VNDYLASRDA EWVGKIHRFL GLSVGTIISD LSSEERRAAY AADITYGTNN
EFGFDYLRDN MAFSPADRVQ RGLHYAIIDE VDSILIDEAR TPLIISGPTE ENTDLYYRVD
KLVGSFVVDE DYTVDEKARQ VMLTEEGIEK AERLMAESGL LVDGDLYDLA NVTLVHHLNQ
ALRAHVIYRR ETDYIVRDGE VCIVDEFTGR MMSGRRWSDG LHQAVEAKEG VAVQNENQTL
ASITFQNYFR MYEKLSGMTG TADTEAFELN QIYGLEVVII PTHRPVCRTD FADLIYRTSQ
EKWKAIVEDI RGCQQRGQPV LVGTTSIEHN EFLSHLLKQA RISHEVLNAK QHQREAEIIA
QAGTPGAVTI ATNMAGRGTD IVLGGNVGHQ VDMVLANPDL EEEEKTRRIE SLKSGWQGLH
DAAIAAGGLH IIGTERHESR RIDNQLRGRS GRQGDPGTTR FYLSLDDPLM RIFGSDRLSG
LMQKLGMKEG EAIEHPWVTK SIENAQRKVE SRNFDIRKQL LEYDDVANEQ RRIIYQQRNA
FMDADDVSAE IRALRDDVLD AVLAATAPEG VMEERWDLPG LEAALDRIFG LQVPVGQWLE
QDKGLTHAAL RERIMEMVLS AYAAKESLMG SEMTRHFEKS ILLQVLDSQW KDHLASMDHL
REGIHLRGYA QKNPKQEYKR ESLIMFNAML DQLREEVVST LSRLHVSPAP AEPLDWDAIA
RAAQPRHLQF SHPDFAAAAA PLVEDAGLAL TGLGVIGEQE AGHSPAISDD KVGRNQPCPC
GSGKKYKHCH GRLQ
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