Gene Lferr_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0400 
Symbol 
ID6876352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp377644 
End bp378156 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content62% 
IMG OID642788273 
Producthypothetical protein 
Protein accessionYP_002218861 
Protein GI198282540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.115955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATA AACGGTGGCA CGCCTGGCGC ACCATGACGC AAGGTTCTTC AGGACCCATC 
GCAGAGGTCT GCCGTCGCGG AACACTGCTG CGCGAGCGTC AGGTCGACTG GAACGGGTTA
CTGGCACTGG AAGCACAGGA TCAAACTTGG CTGGTTGACT GGTCCGGGGG GGTGCTGAGC
GTACTTTGTC AGAGCCCGGT ATGGATTTCC TGGCTGCGAA GAAATGAAAA AAACATACTG
AAACGATGGA ATACCCGTTT CCCGGAAACG TCGGCGAGGC AAATCGTCGC CACAGTCCGG
CCCTGGTCAT ACCGGCTGCC GCAGTCGGCA GGAATTCAGC GGGCGCCTCA GATTTCAGCA
GAGGCACCCG AGGCGCTGCG CGCCGTGACC GGGCAGGTGC CCCAGGCCGT CGCCGCCGCC
CTGCAGCGCC TGGCCAACAC CATGGACCGT CTTCAGGCGG AGGCCGTCAC CAAGGTGTCG
GCAAAGGAAA ACGGCGCACG CCGCTCGGCG TAA
 
Protein sequence
MDDKRWHAWR TMTQGSSGPI AEVCRRGTLL RERQVDWNGL LALEAQDQTW LVDWSGGVLS 
VLCQSPVWIS WLRRNEKNIL KRWNTRFPET SARQIVATVR PWSYRLPQSA GIQRAPQISA
EAPEALRAVT GQVPQAVAAA LQRLANTMDR LQAEAVTKVS AKENGARRSA