Gene Lferr_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0399 
Symbol 
ID6876351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp376790 
End bp377704 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content58% 
IMG OID642788272 
ProductUDP-3-0-acyl N-acetylglucosamine deacetylase 
Protein accessionYP_002218860 
Protein GI198282539 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.796258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.130668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGTC AGCGTACACT TAAGAACATG ATCTGGGGTA CAGGAATCGG TTTGCACAGT 
GGCAAGAAGG TCTACATCGG CCTGCGCCCG GCACCTGTAA ACACGGGGAT CGTATTCCAC
CGCAGCGATA TCGAGGGTGG CGCCTGGATC AAAGCGGACC CGCTCCATGT GGTGGATACC
CGCCTTTCCA CCAATATCGG CGATGGCCAT ATCCGGGTTG GCACCGTTGA ACACCTGATG
TCGGCCTTGG CGGGTCTTGG TATCGACAAT GCCTATGTGG ATCTCGACGG ACCCGAAGTG
CCCATCATGG ATGGTAGCGC TGCGCCCTTC GTATTCCTCA TCCAGTGCGC GGGGATTGAA
GAGCAGAATG CCCCGAAGCG ATTCATCCGC ATCACCAAAC CGCTCAAGGC GGAAGATGGC
GATCGCTGGG TACAACTGGA GCCATTCGAA GGCTTCAAGG TGAGTTTCGC CATCGATTTC
GACCATCCGG TGATGAAAAA CGGCGGTCAG GAGGTGACGG TGGACTTTGC CCGCACTTCT
TACCTCAAGG AAGTGGCCCG TGCGCGAACC TTCGGCTTCA TGCGCGAAGT CGAAGCGTTG
CGGCGGATGG GCTTGGCCCT CGGCGGCAAT CTGGACAACG CTATCGTGGT CGACGATTAC
CGTGTGCTCA ACGAAGAAGG GCTGCGCTAC ACCAATGAGT TCGTGCGCCA TAAGGTGCTG
GATTCCATAG GTGATCTCTA CCTGCTCGGG CATCCGCTGG TCGGCCATTT TTCCGGACAC
AAGGCCGGAC ACGCCCTCAA CAACAGTCTG CTGCGGGCGC TGCTTCTCCG TCAGGACGCC
TGGGAGTTTG TGGATTACGC CGAGCGGCGT GCGCCGTTTT CCTTTGCCGA CACCTTGGTG
ACGGCCTCCG CCTGA
 
Protein sequence
MIRQRTLKNM IWGTGIGLHS GKKVYIGLRP APVNTGIVFH RSDIEGGAWI KADPLHVVDT 
RLSTNIGDGH IRVGTVEHLM SALAGLGIDN AYVDLDGPEV PIMDGSAAPF VFLIQCAGIE
EQNAPKRFIR ITKPLKAEDG DRWVQLEPFE GFKVSFAIDF DHPVMKNGGQ EVTVDFARTS
YLKEVARART FGFMREVEAL RRMGLALGGN LDNAIVVDDY RVLNEEGLRY TNEFVRHKVL
DSIGDLYLLG HPLVGHFSGH KAGHALNNSL LRALLLRQDA WEFVDYAERR APFSFADTLV
TASA