Gene Lferr_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0388 
SymbolmraY 
ID6876339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp364413 
End bp365495 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content60% 
IMG OID642788261 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_002218849 
Protein GI198282528 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.615707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTACG CCCTCTTCAT GCAGCTCGGC AGCCTCTATC ACGGCTTTTA CGTTTTTCAG 
TATCTGACCC TGCGCGGCGT GCTCGCCACC CTCACCGCGC TGGTCCTTTC GCTGTTCATC
GGCCCCTTCT TCATCGCCCG CCTGCGCCGC TACAAAATCG GTCAGATGGT TCGCAATGAC
GGTCCCGAAA CCCATTTGAT CAAGCAGGGT ACGCCGACCA TGGGCGGCGC GCTGATCCTG
CTGGTGGTCA TTCTGACAAC CCTGCTCTGG TCGGATCTGG GCAATCCGCT GGTCTGGGTG
GCGGTGCTCA CCACCCTGGC CTTTGGTGCC ATCGGTTTCG TCGACGACTG GCGCAAGCTG
CGACGCCAGA ACAGCAAGGG TCTCTCGGCA CGGGCCAAAT ACGGTTTACA GTCGCTGGTG
GCCTTTGCCG CGGGGGGGGT GCTCTATGCC CTGGCCAGCA ATCCCGTGGA GACCAGCCTC
ATTCTGCCTT TTATACCGCA TGTGTTGATC CCGATGGGCG CCGGCTTCAT CGTCTTCAGT
TATTTCGTAA TTGTCGGCAC CTCCAATGCC GTGAACCTGA CCGACGGTCT GGACGGCCTG
GCCATCGTCC CGACGGTCAT GGTCGCCGGC GCACTGGGCG TATTTGCCTA CGTATCGGGC
AACGCCGTCT TTGCCCGCTA CCTGGACGTA CCCTGGGTGC CGGGTTCCGG CCAGATGCTG
ATATTCTGCG GGGCACTGGT GGGTGCGGGG CTGGGTTTTC TATGGTTCAA CACCTATCCG
GCGGATGTCT TCATGGGCGA TACCGGCGCT CTCGCGCTGG GTGCGGCGCT GGCCATCGTC
GCCATCGTCG CCCGTCAGGA ACTGGTGCTA TTCATCATGG GCGGCGTATT CGTGGTAGAA
ACCTTGTCCG TCATCATTCA GGTGGTCTCC TTCCGGCTCA CCGGCAAACG GGTCTTTCGC
ATGGCGCCCC TGCATCATCA TTTTGAAAAA AAAGGCTGGC CCGAACCCCG GGTGGCGGTC
CGTTTCTGGA TCATCACCGT GATTCTGGTC CTCGTTGGCC TTTCCAGTCT GAAGATCCGC
TGA
 
Protein sequence
MLYALFMQLG SLYHGFYVFQ YLTLRGVLAT LTALVLSLFI GPFFIARLRR YKIGQMVRND 
GPETHLIKQG TPTMGGALIL LVVILTTLLW SDLGNPLVWV AVLTTLAFGA IGFVDDWRKL
RRQNSKGLSA RAKYGLQSLV AFAAGGVLYA LASNPVETSL ILPFIPHVLI PMGAGFIVFS
YFVIVGTSNA VNLTDGLDGL AIVPTVMVAG ALGVFAYVSG NAVFARYLDV PWVPGSGQML
IFCGALVGAG LGFLWFNTYP ADVFMGDTGA LALGAALAIV AIVARQELVL FIMGGVFVVE
TLSVIIQVVS FRLTGKRVFR MAPLHHHFEK KGWPEPRVAV RFWIITVILV LVGLSSLKIR