| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0382 |
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| Symbol | |
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| ID | 6876333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 357631 |
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| End bp | 358557 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642788255 |
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| Product | D-alanine/D-alanine ligase |
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| Protein accession | YP_002218843 |
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| Protein GI | 198282522 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0398495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.161369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGATT TAGCCCGCAT CGCCGTACTT TACGGAGGCC CCTCCGGAGA ACGCGAAGTC
TCTCTCGACA GCGGTCACGC CGTGTTGCAA ACCTTGCAGG GGCTGGGCAT GGATGCCGTC
GGCGTCGACA TCCAGCCGGC CATCCTCCAG CAGCAAATGG CCGAAAGCGG AGCACAGATC
GCCTTCAACG TCTGCCATGG CGCGGTAGGC GAAGACGGTC TGTTGCAGGC CTGCCTGGAG
ACTCTGGATA TGCCCTACAC CGGCAGCGGT GTCCTCGCCT CCGCTCTCGC CATGGATAAA
TGGCGCTGCA AGCAGCTCTG GCGAGCCGCC GGTTTACCGG TGACCGACGG CATCCTGCTG
CATCGCGGCA GCCATACGCC CGACCTCGGC GCCCGCTTCG GCTGGCCCCT GTACATCAAG
CCGAACCACG GTGGCTCCAG CCTCGGGGTC AGCAAAGTCG GCGGCCCGGC GGAATTGGAT
GCGGCCTTGC AGTGCGCCTT CGCCATCGAG GATGAAGTCC TCTGCGAGGG TGCCGTCATC
GGTCACGAAG TCACCGTCGG CATCCTCGAT GGCCAGGCGC TGCCGCCGAT CGTCATCGAA
ACGCCCCGGG CCTTCTATGA CTACACCGCC AAGTATCTCG CCGACGATAC CCGTTATCTC
CTGCCCTCCG GCCTCGGCGC TCCGCTGGAG CAGCAGTTGC AGGCACTTGC GCTCCGAGCC
TTTGCCGAGC TCGGCTGCCG CGACTGGGGG CGGGTCGACT TCATGATCGG CGGCGACGGT
CGACCCCATC TGCTGGAAGT CAACAGTGTG CCCGGCATGA CCAGCCACAG CCTGATTCCC
ATGGCCGCCA AAGCCACCGG CATGGGCTTC CCGGAATTAT GCGCCACCAT ACTGCGCACC
GCGCAGAGGA GAGTGAAACA TGGTTAG
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| Protein sequence | MSDLARIAVL YGGPSGEREV SLDSGHAVLQ TLQGLGMDAV GVDIQPAILQ QQMAESGAQI
AFNVCHGAVG EDGLLQACLE TLDMPYTGSG VLASALAMDK WRCKQLWRAA GLPVTDGILL
HRGSHTPDLG ARFGWPLYIK PNHGGSSLGV SKVGGPAELD AALQCAFAIE DEVLCEGAVI
GHEVTVGILD GQALPPIVIE TPRAFYDYTA KYLADDTRYL LPSGLGAPLE QQLQALALRA
FAELGCRDWG RVDFMIGGDG RPHLLEVNSV PGMTSHSLIP MAAKATGMGF PELCATILRT
AQRRVKHG
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