Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0378 |
Symbol | |
ID | 6876329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 353296 |
End bp | 354153 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642788251 |
Product | Conserved hypothetical protein. putative conserved domain |
Protein accession | YP_002218839 |
Protein GI | 198282518 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00161389 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0389324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATACC CTGAGTTGTT CAAATCGCTG GAAGCCGCGC GCTGGAACAT GGCCACGGAC ATCCCCTGGG AGCAGTTTGA CCGTAACCTG GTCAGCGATG AGCAGTTGCG CACGATCAAG ATGAATGCGG TCACCGAGTG GTCGGCACTC CCGGCGACGG AGATGTTTCT CCGCGACAAC CGGAGCGACT CCGATTTCTC GGCCTTCATG TCCATCTGGT TCTACGAAGA GCAGAAGCAC GCCCTGGTGC TCATGGAATA CCTGCGCCGC TTCGCGCCGG AATATCTGCC GACGGAAGAG GAATTGCACA ATGTACGCTT TGAATTTGAT CCGGCGCCAG CAATGGAAAC CCTCATGCTG CATTTTTGCG GCGAAATCCG CCTGACACAC TGGTACAAAT GCGCGGCGCA GTGGCATAGC GAGCCGGTGA TCCGCTCGAT TTACGAGGTG CTATCCAAGG ATGAGGCGCG GCACGCCGGT GTATATCTGA AATATATGCG GCGCGCCATT GATCGCCTCG GGGACAGCGC GCGTCTGGCT TTTGCCAAGA TCGGTGTACT CATGGCCAAT ACCAAGACGG CGAAGGCATT GCATCCCACC AATCTCCATG TGAACAAGGC GATGTATCCC GAGGACAGTG TGCAGAGTCA TCTGCCGGAT CCGGGTTGGC TGGAGCAATG GCTGGATACC CAGATTCATT TCGACGCGAT CTGGGAGGGC AAGGTGGTCA ATGGCATTTT GCGCAATCTT TCCGCTCTGC TCGAAACGCC CATTCAGAGC ATCAAGGATC TCAGCCGTTA CCGCAAGGTG ATGAGCGCCG CCGCCCATGA TGCTTCCGGG CACTTGGTGG CGGGTTGA
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Protein sequence | MLYPELFKSL EAARWNMATD IPWEQFDRNL VSDEQLRTIK MNAVTEWSAL PATEMFLRDN RSDSDFSAFM SIWFYEEQKH ALVLMEYLRR FAPEYLPTEE ELHNVRFEFD PAPAMETLML HFCGEIRLTH WYKCAAQWHS EPVIRSIYEV LSKDEARHAG VYLKYMRRAI DRLGDSARLA FAKIGVLMAN TKTAKALHPT NLHVNKAMYP EDSVQSHLPD PGWLEQWLDT QIHFDAIWEG KVVNGILRNL SALLETPIQS IKDLSRYRKV MSAAAHDASG HLVAG
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