Gene Lferr_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0378 
Symbol 
ID6876329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp353296 
End bp354153 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content57% 
IMG OID642788251 
ProductConserved hypothetical protein. putative conserved domain 
Protein accessionYP_002218839 
Protein GI198282518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00161389 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0389324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATACC CTGAGTTGTT CAAATCGCTG GAAGCCGCGC GCTGGAACAT GGCCACGGAC 
ATCCCCTGGG AGCAGTTTGA CCGTAACCTG GTCAGCGATG AGCAGTTGCG CACGATCAAG
ATGAATGCGG TCACCGAGTG GTCGGCACTC CCGGCGACGG AGATGTTTCT CCGCGACAAC
CGGAGCGACT CCGATTTCTC GGCCTTCATG TCCATCTGGT TCTACGAAGA GCAGAAGCAC
GCCCTGGTGC TCATGGAATA CCTGCGCCGC TTCGCGCCGG AATATCTGCC GACGGAAGAG
GAATTGCACA ATGTACGCTT TGAATTTGAT CCGGCGCCAG CAATGGAAAC CCTCATGCTG
CATTTTTGCG GCGAAATCCG CCTGACACAC TGGTACAAAT GCGCGGCGCA GTGGCATAGC
GAGCCGGTGA TCCGCTCGAT TTACGAGGTG CTATCCAAGG ATGAGGCGCG GCACGCCGGT
GTATATCTGA AATATATGCG GCGCGCCATT GATCGCCTCG GGGACAGCGC GCGTCTGGCT
TTTGCCAAGA TCGGTGTACT CATGGCCAAT ACCAAGACGG CGAAGGCATT GCATCCCACC
AATCTCCATG TGAACAAGGC GATGTATCCC GAGGACAGTG TGCAGAGTCA TCTGCCGGAT
CCGGGTTGGC TGGAGCAATG GCTGGATACC CAGATTCATT TCGACGCGAT CTGGGAGGGC
AAGGTGGTCA ATGGCATTTT GCGCAATCTT TCCGCTCTGC TCGAAACGCC CATTCAGAGC
ATCAAGGATC TCAGCCGTTA CCGCAAGGTG ATGAGCGCCG CCGCCCATGA TGCTTCCGGG
CACTTGGTGG CGGGTTGA
 
Protein sequence
MLYPELFKSL EAARWNMATD IPWEQFDRNL VSDEQLRTIK MNAVTEWSAL PATEMFLRDN 
RSDSDFSAFM SIWFYEEQKH ALVLMEYLRR FAPEYLPTEE ELHNVRFEFD PAPAMETLML
HFCGEIRLTH WYKCAAQWHS EPVIRSIYEV LSKDEARHAG VYLKYMRRAI DRLGDSARLA
FAKIGVLMAN TKTAKALHPT NLHVNKAMYP EDSVQSHLPD PGWLEQWLDT QIHFDAIWEG
KVVNGILRNL SALLETPIQS IKDLSRYRKV MSAAAHDASG HLVAG