| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0372 |
|---|
| Symbol | |
|---|
| ID | 6876323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 348605 |
|---|
| End bp | 349237 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642788245 |
|---|
| Product | MJ0042 family finger-like protein |
|---|
| Protein accession | YP_002218833 |
|---|
| Protein GI | 198282512 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02098] MJ0042 family finger-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.14775 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTA CCTGCCCCCG CTGTGAATCG ACCTTTCTCT CGGACGACAA GGCCCTGCGC
GAGCACCATT ATCGGGTGAA ATGCAGCGTC TGCCACCATA TTTTTCATGT GGATGTCGCC
GCAGAGACTG CTCGTGCGGG TAGCAGCCTG GGACGCCGTC TGGGTCGGTT TCTGCTCATC
CTGGCCATCA TCCTGTTGGT TATCGCGCTG ATCGGGCAGA TACTCTGGTG GACACGCAGT
TACAGTTACG CCGCGACCAG CGCGCCCATC CGCCGCTTCT TGCTGAGTAG CGCGGAGCAA
CTGGATATCA CCATTCCCTG GCCTGGTCCC AACAAAGACA TCCGTATTCT CAACAGCCAG
GTCACCCCTG TGGCGGACCA CCTGGCGCGG ATCACCGGCA ATATTGAAAA TGTCGCCAAT
CAGGTTCAGG CTTACCCGGT GATTGAAGTC ACCCTCAGCA ACGTCTACGG CGCACCCATT
GCCCACCTGC ATTTTACCGC GACGCAATAT CTGAGCGCAG AATTCCCCGC CCGTGCGGGA
TTCGTTCCGG GTACGCCAGT ACCATTTGTA CTCAGCAGCC CCGCCCTGAC AAGGGCGGCG
GGTTATCAAA TCACCCTCCT CAGCCGTCCT TGA
|
|---|
| Protein sequence | MEITCPRCES TFLSDDKALR EHHYRVKCSV CHHIFHVDVA AETARAGSSL GRRLGRFLLI
LAIILLVIAL IGQILWWTRS YSYAATSAPI RRFLLSSAEQ LDITIPWPGP NKDIRILNSQ
VTPVADHLAR ITGNIENVAN QVQAYPVIEV TLSNVYGAPI AHLHFTATQY LSAEFPARAG
FVPGTPVPFV LSSPALTRAA GYQITLLSRP
|
|---|
| |