| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0370 |
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| Symbol | |
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| ID | 6876321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 347719 |
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| End bp | 348369 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642788243 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002218831 |
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| Protein GI | 198282510 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.149841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAG CGCTGTTGCT GCTTTACGGA GGTACGGCGG AAGCCGATAT TTATGCCTAT
ACCGATAGCA GCGGGGTGGT GCATCTTACC AATGTGCCGG CCGGGAATGA CCGGTACCGG
ATGGTCATGC GGACCCCAAA AATGGCGGTG GCCGTGGCGC GCGCCGATTT CAATCGCGTC
GCCCGGAGGC GTTATCAGGG CCTGATTCAT GCGGCCGCCA ATCGTTACCA GGTCAGCTCG
GCGCTGATCA ACGCCGTCAT CAGCGCGGAG TCCGGTTATA ATGCGGGTGC GGTATCGCCC
AAGGGCGCCG TTGGCCTGAT GCAGCTCATC CCCGCAACGG CGCTTCGCTT CGGGGTGGCG
AATGTGTTCA GTCCGACGGA CAATATCAAC GGCGGCACCG CGTATCTGGC CCATTTGCTG
CGGATCTTCA GCGGCGACCT GAAACTGGCC GTAGCCGCTT ACAATGCGGG ATCAAACGCA
GTGATCCAGG CGGGTTATCA TGTCCCGCCC TTCGCCGAAA CCCAGGCCTA CGTACCGCGG
GTGCTCGCTT ATTATCAGCA CTATCTGAAT GGCGGCGGCA CGGTATCGGG CGAGAACCGG
CAGCCCGTGG CAAATGCCGC CCCGCAGTTG ATTCAGGTAT CCAATCCGTA G
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| Protein sequence | MAAALLLLYG GTAEADIYAY TDSSGVVHLT NVPAGNDRYR MVMRTPKMAV AVARADFNRV
ARRRYQGLIH AAANRYQVSS ALINAVISAE SGYNAGAVSP KGAVGLMQLI PATALRFGVA
NVFSPTDNIN GGTAYLAHLL RIFSGDLKLA VAAYNAGSNA VIQAGYHVPP FAETQAYVPR
VLAYYQHYLN GGGTVSGENR QPVANAAPQL IQVSNP
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