| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0367 |
|---|
| Symbol | |
|---|
| ID | 6876318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 345285 |
|---|
| End bp | 346037 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642788240 |
|---|
| Product | protein of unknown function DUF1342 |
|---|
| Protein accession | YP_002218828 |
|---|
| Protein GI | 198282507 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.205908 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.320961 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTTT ACGAACACCC GCTCCATGAA CGCGCCCGCC TGCTGCTGCG TCTGGAAAGC
GTCTTTGCAC AACTACAGCA GGGGCCGGCC GATGCTGGCT GCCTGCGTAA CGCCCTGCGC
GCCTATAATG AACTGCTGGA TTTTTGCAGC CGCCCGGAGT TGCGCCTGGA TCTCATTCTG
GAGCTGGAGC GTCTGGCCCA GAGCCTTGCC ATCTGGTCGC AGAGTCCCGA GGCGGACGAA
GGCCCTTTGC GCGCCTGGCA GTTTCGCATA GACCTGCAAC TCAAAGCGCT GCGCGAGTAT
CGCGAACCCT TCGGGCAACT GTTGCGCCAC CAGGATATCA TCCAGCTTGC ACGGGGCAGG
ATGGGGGTGG CCGGAGGTCT CGCCGACTGT GATCTGCCGG TTCTGGCCTT CTGGAAATAT
CAGCCCCCCG AGCGTATCGC GGGACTCCTG CGGGGTTGGC GGGAGAGTCT GTCGATCTTG
CAGGATAGCA CCGATCTGAT CCTCGCCTTG CTGCGGGACT CCTGCTCGTG GTCCGGCGTG
GAAGCCCCGG AGGGGCGTTA TGGCGCGCTT CTGGACGCAC GCCATCCGCC TTCCCTGATC
TGCCTGGAGT TGTCGGATCG TGCGGATTAC TATCCCAAAA TCAGTGGGGG TATCCATCGT
TTTCACATCC AGTGGCTGCC ATGGTTGGAC CAGGGAACGG CGCGCGCGAT AGAATCCACC
ATAAAATTTC GCCTGGGACT CAGTGCCCTC TGA
|
|---|
| Protein sequence | MAVYEHPLHE RARLLLRLES VFAQLQQGPA DAGCLRNALR AYNELLDFCS RPELRLDLIL
ELERLAQSLA IWSQSPEADE GPLRAWQFRI DLQLKALREY REPFGQLLRH QDIIQLARGR
MGVAGGLADC DLPVLAFWKY QPPERIAGLL RGWRESLSIL QDSTDLILAL LRDSCSWSGV
EAPEGRYGAL LDARHPPSLI CLELSDRADY YPKISGGIHR FHIQWLPWLD QGTARAIEST
IKFRLGLSAL
|
|---|
| |