| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0350 |
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| Symbol | |
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| ID | 6876301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 328439 |
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| End bp | 330001 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642788223 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002218811 |
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| Protein GI | 198282490 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.976424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.915508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAACAT TACCATCCCT CTCCCAAATC TGGCCCCTCT TCGCGGGGGT TGGCCTTGCC
CTTGGCATGG GCTCTTTCGA TGGCGCCGCG CTACAGGGCA TTTTTCCCTA CGTCGCGGGC
GGCCTCTCCA CCAGCAGCGA TCACGCCCTC TGGACTCTCA CCTACTTTAT CGTTCACTGG
TCACTGGGGA TCTCCCTGAT GCCGTGGACA ACCGCCCGCT TCGGCATGCG CCGCGTCTTT
CAGGTGGCGG TTATCGTGGC CATGGCGGGT ACCCTCATCA GTGCGGTGAC CGACAATCTC
TGGATCATGC TGCTGTCCCG CGCCCTGCAG GGTATCGCCG CAGGAATTCT TGTCCCCCTC
AGCCAGAGCC TCTTTTTACG CCACAGTCCG AAAGCGCACC ACGGCATGGT CACCATCTTC
TGGAGCAACG CCATGCTGGT GCCATTTTTC TTCGGGCCGG CCATTGGCGG CCTGCTGGCG
ACAGAACTCG GTTATCGCAG CATTTTTCTG CTGTCCTTGC CGATCTGGGG CGTCGCCCTG
TTTCTGGGCA GCGCGGGCGT TCCCAAAGAT CGCGGTGACC CCCGGACGCC GCCCTTCGAC
GGCTGGGGTT TCGGCCTGCT CTACGGCGGA CTGATGAGCA TGCAGGTAGT ACTGGATCAG
GGCGAGCAGT ACGGCTGGTG GCATTCGGCC TTCATCCTGA AAACGACCCT GTTCGCTTTC
ATCTTCCTGC TGCTCTTTGC CTGGCGCGAA AGCGAGACCC GCCATCCCCT GCTGCAACTG
CACTTTTTGC GTCGGCGCAA TTACTGGCTG GGGCTGCTGC TGCTGTGCCT GGGCTGGGCC
ATGTTCATGG GCTGGGCCTC CCTGCTGCCC CTCTGGGCGG AGGAAACACT CGGTTTCAAC
GGGTTCTGGG GGAGTGCGGT GCTCGTTCCC CTTGCCCTCG GCGCCATCCC CTTGTCGACC
CTGATGGACC GCCTGCACGG ATTATTGGGC CTGCGCCGTC TGACGACCCT CTGCTTTGCC
ATTTTTGCCT TCGCCTACGG CAGCGCCTAT CTCAGTCCCA TCAGCAGCCT GGGCGACCTG
TTCTGGCCGG TGCTGTTCAT CGGCATGGGG GTGGGCATGC TCTTCGTACC GCTCACCATG
GTGATTCTCT CCGGCCTCAG TGCCCAGGAA ATTCCGTCAG CAGCCACCAC CAGCAATTTC
ATTCGCGTCT TCAGCGCCAA CATCGGGGTG AGCCTGCTGA GCGTCTACTG GACCCGTTAC
AGCGCCCTTG CTGGCGACCA CCTGCGTAGC CATGTCAGTC GCTTTGGCGG GCACACCACA
CTCTCAGCTC AGCACCTGCA CGCCCTGATC AGCGCGCAGG CAGGCACCCT GAGCATCGAC
AACCTGCTGC GCCTGTCCAT GTGGGCCTGC CTGGCAGCCG CCATAGCCGC CTACGTCTTT
ATCATTCCGC CCAGCACCCT GCGCAGCACC GACGGTCCGC GCAATTATGT GGAGGAGGAA
GAGGACGAGT TTCCCATAAC GGCCGGTGCG CCAATGGGGG AGGGCGCGGG CATATCTTCC
TGA
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| Protein sequence | METLPSLSQI WPLFAGVGLA LGMGSFDGAA LQGIFPYVAG GLSTSSDHAL WTLTYFIVHW
SLGISLMPWT TARFGMRRVF QVAVIVAMAG TLISAVTDNL WIMLLSRALQ GIAAGILVPL
SQSLFLRHSP KAHHGMVTIF WSNAMLVPFF FGPAIGGLLA TELGYRSIFL LSLPIWGVAL
FLGSAGVPKD RGDPRTPPFD GWGFGLLYGG LMSMQVVLDQ GEQYGWWHSA FILKTTLFAF
IFLLLFAWRE SETRHPLLQL HFLRRRNYWL GLLLLCLGWA MFMGWASLLP LWAEETLGFN
GFWGSAVLVP LALGAIPLST LMDRLHGLLG LRRLTTLCFA IFAFAYGSAY LSPISSLGDL
FWPVLFIGMG VGMLFVPLTM VILSGLSAQE IPSAATTSNF IRVFSANIGV SLLSVYWTRY
SALAGDHLRS HVSRFGGHTT LSAQHLHALI SAQAGTLSID NLLRLSMWAC LAAAIAAYVF
IIPPSTLRST DGPRNYVEEE EDEFPITAGA PMGEGAGISS
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