Gene Lferr_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0347 
Symbol 
ID6876298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp325286 
End bp325753 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content54% 
IMG OID642788220 
Productprotein of unknown function DUF1790 
Protein accessionYP_002218808 
Protein GI198282487 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.254483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.742766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATT TGGAAGTTGC CGAGAAGCTG TTTGCCGAAC TGGAATGGGA AGCGAAAACG 
CTGCCCGATT ATCCGGTTCT CACTTGCGCG GTGCAGGTAC CCAATGGCGT TCTGGATATT
TTTTGCCATG TGCATGGCGA ACGGGAGCGT ATCCTGTTTT ACTTGCGTCC CCAGAATCTG
GAGATAACGA TGGAAAAACG CCTGGCGGTG GCGGAGTTTC TGACTCGGGC CAACTATGGG
CTGGCTCTGG GTAACTTTGA GCTCGATATG GAGGATGGAG AAATCAACTT CAAGACGATT
CTCCAGGCGC CTCTCACGGT GTTGAGCACT ACCCTGCTGC GTCCTTATCT GCTGGTTGGC
GTAGAGACCA TCAACCACTA TCTGCCAGGG CTGGAACGGG TGCTGAGTGG CCAGGAAACC
CCGGCTGCCG CGATTAAGGC GCTGGAGATT GCGACAGCGG TACATTGA
 
Protein sequence
MNHLEVAEKL FAELEWEAKT LPDYPVLTCA VQVPNGVLDI FCHVHGERER ILFYLRPQNL 
EITMEKRLAV AEFLTRANYG LALGNFELDM EDGEINFKTI LQAPLTVLST TLLRPYLLVG
VETINHYLPG LERVLSGQET PAAAIKALEI ATAVH