Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0346 |
Symbol | |
ID | 6876297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 324483 |
End bp | 325289 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642788219 |
Product | dimethyladenosine transferase |
Protein accession | YP_002218807 |
Protein GI | 198282486 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.335401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.775767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCAAG AGGGGGGGCT GCCGCGCGCC AAAAAGCGTT TCGGGCAGAA TTTTTTGGTT CAGCCGCAGA TTGTCGAGCG CATTGTGGCG GCTATCCGCC CGGCGTCCGG CGATCATCTG GTGGAGATCG GGCCGGGGCC GGGGGCGCTG ACCAAGTCCC TGCTGCGCCT CTTGCCGCAG TTCACGGTGG TGGAACTGGA TCGGGATATG ATTGCCGGTT TACGCGCACT CGCGCCACCG GAGCAGTTGC GGGTCTTGCA GGCCGATGCA CTGGAGGTCG ACTTCGCGGC GCTGGCCGGC GCCGGGAATG CCCTGCGGAT AGTCGGCAAC CTCCCCTACA ACGTGGCGAC ACCGCTGATT TTCCATATTC TGGAACACGC AGAACAGGTG CGGGATATGC ACTTCATGCT GCAAAAAGAG GTGGTGGACC GGGTGGTGGC GATGCCGGGA AGCAAGGCGT ACGGACGGCT TTCGGTGATG ATACAGGCGT ACTGCGCGGT GGAATCCCTG TTCACGGTGG CCCCGGGGAA TTTCTTTCCG GTGCCCAAGG TGGATTCGGC CTTCATGCGT CTGATACCGC ATCGTCCGGG GTTGCTGCCC CCGCACCTGC AGGCGCCCTT CGCACGGATT GTGGCCACCA GTTTTGCCCA GCGCCGCAAG ACTCTCGCCA ATAATCTGCG CGGCATTTTG AGTGCGGACG ACTTGCGGGG TTTGCAGATC GATCCCGGCA GCCGTGCCGA GACGCTGGAT CAGGCCGCCT TTTTTCGCCT CGCCGAGGCC ACCGTTGAAC AGGGAAACCG ATCATGA
|
Protein sequence | MMQEGGLPRA KKRFGQNFLV QPQIVERIVA AIRPASGDHL VEIGPGPGAL TKSLLRLLPQ FTVVELDRDM IAGLRALAPP EQLRVLQADA LEVDFAALAG AGNALRIVGN LPYNVATPLI FHILEHAEQV RDMHFMLQKE VVDRVVAMPG SKAYGRLSVM IQAYCAVESL FTVAPGNFFP VPKVDSAFMR LIPHRPGLLP PHLQAPFARI VATSFAQRRK TLANNLRGIL SADDLRGLQI DPGSRAETLD QAAFFRLAEA TVEQGNRS
|
| |