Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0340 |
Symbol | |
ID | 6876291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 320710 |
End bp | 321348 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642788213 |
Product | toluene tolerance family protein |
Protein accession | YP_002218801 |
Protein GI | 198282480 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.624229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCAAA TTTCGTTTGT TGCTCTGCTT GTTGTGCTGT TGACCTGGAC CCTTCCCGCT GCTGCCGAAG ATACCCAGGG GGCGGTAACG GTCGTTCAGC AGCTTACCAA CAGTGTCCTG AAGGTGTTAC GCTCGAACGA AGGCAAGCCC ATCACGCCGT CCGTGAAGAA GGAAGTGGCC GATATCGTCC TGCCGCACAT GGATTTTACC ACCATGTCGC AATATGTGAT GGCGCAATAC TGGCGGCAGA TGAGCCCGGC GCAGCAGCAG GAGTTTGTAG CGCTGTTCAA GGATCTCCTG GTGCGCACCT ACAGCAATTC GCTCAACCAT TATCATGGAC AGACCGTAAG AATCACCGGC AGCCAGCAGA TCTCCCAGAA TCCGCCGGTG GCTCAGGTGA ATATGGTGAT CCGTCAGAAC GGCGGTGGAC CGGATGTTCC GGTGATCTAC GCCCTGCTCT ATACCAACAA CACCTGGCGG ATCTACAACA CCTACATCGA CGGGGTCAGC ATGGTGCTGA ACTACCGGCA AAGCTTTGGC CAGATCGCCG CGAGCCGCGG GATCCCCGCC TTGTTGCAGG ACATGAAAGC CAAGGATGAC GTAGGCGGCG CGCCAGACAA AAGGGCGGCC GCCGCTTGA
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Protein sequence | MRQISFVALL VVLLTWTLPA AAEDTQGAVT VVQQLTNSVL KVLRSNEGKP ITPSVKKEVA DIVLPHMDFT TMSQYVMAQY WRQMSPAQQQ EFVALFKDLL VRTYSNSLNH YHGQTVRITG SQQISQNPPV AQVNMVIRQN GGGPDVPVIY ALLYTNNTWR IYNTYIDGVS MVLNYRQSFG QIAASRGIPA LLQDMKAKDD VGGAPDKRAA AA
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