Gene Lferr_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0340 
Symbol 
ID6876291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp320710 
End bp321348 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content57% 
IMG OID642788213 
Producttoluene tolerance family protein 
Protein accessionYP_002218801 
Protein GI198282480 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.624229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCAAA TTTCGTTTGT TGCTCTGCTT GTTGTGCTGT TGACCTGGAC CCTTCCCGCT 
GCTGCCGAAG ATACCCAGGG GGCGGTAACG GTCGTTCAGC AGCTTACCAA CAGTGTCCTG
AAGGTGTTAC GCTCGAACGA AGGCAAGCCC ATCACGCCGT CCGTGAAGAA GGAAGTGGCC
GATATCGTCC TGCCGCACAT GGATTTTACC ACCATGTCGC AATATGTGAT GGCGCAATAC
TGGCGGCAGA TGAGCCCGGC GCAGCAGCAG GAGTTTGTAG CGCTGTTCAA GGATCTCCTG
GTGCGCACCT ACAGCAATTC GCTCAACCAT TATCATGGAC AGACCGTAAG AATCACCGGC
AGCCAGCAGA TCTCCCAGAA TCCGCCGGTG GCTCAGGTGA ATATGGTGAT CCGTCAGAAC
GGCGGTGGAC CGGATGTTCC GGTGATCTAC GCCCTGCTCT ATACCAACAA CACCTGGCGG
ATCTACAACA CCTACATCGA CGGGGTCAGC ATGGTGCTGA ACTACCGGCA AAGCTTTGGC
CAGATCGCCG CGAGCCGCGG GATCCCCGCC TTGTTGCAGG ACATGAAAGC CAAGGATGAC
GTAGGCGGCG CGCCAGACAA AAGGGCGGCC GCCGCTTGA
 
Protein sequence
MRQISFVALL VVLLTWTLPA AAEDTQGAVT VVQQLTNSVL KVLRSNEGKP ITPSVKKEVA 
DIVLPHMDFT TMSQYVMAQY WRQMSPAQQQ EFVALFKDLL VRTYSNSLNH YHGQTVRITG
SQQISQNPPV AQVNMVIRQN GGGPDVPVIY ALLYTNNTWR IYNTYIDGVS MVLNYRQSFG
QIAASRGIPA LLQDMKAKDD VGGAPDKRAA AA