| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0339 |
|---|
| Symbol | |
|---|
| ID | 6876290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 320235 |
|---|
| End bp | 320693 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642788212 |
|---|
| Product | Mammalian cell entry related domain protein |
|---|
| Protein accession | YP_002218800 |
|---|
| Protein GI | 198282479 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.620596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAC GGGCGATAGA CTGGTGGGTG GGCATCTTCG TGCTCCTCGG TATCGCTGCT
CTGGTAGTAT TGGCGCTGCG CGTGGGCAAC CTCTCTGGCT TCGCCTACAA CGACGGTTAT
GTGCTGCATG CGGATTTCTC CAATGTCGGC AGCCTGAAAC CGCGCAGCCC GGTGAAACTG
GGCGGCGTTA CCATTGGCGA GGTGACCCAC ATCGGCATGA ACCCCAAGAC CTTCATGGCG
AAGGTGACGA TGCGGATCGA ACCGCAGGTG AAGTTGCCGA CGGATACGGG GGCGTCCATC
TACACCGAGG GGCTTCTGGG CGAACAGTAT GTCTCTATTC AGCCGGGCGG CATGCCTCAG
GATCTACAGC CGGGTGGTAC CATTACCATG ACGCAAAGCG CTGTCAATAT CGATCAGCTT
ATCGGCCAGA TGGTCTTCAG TAAGGCCTCG GGCAAGTAA
|
|---|
| Protein sequence | MEKRAIDWWV GIFVLLGIAA LVVLALRVGN LSGFAYNDGY VLHADFSNVG SLKPRSPVKL
GGVTIGEVTH IGMNPKTFMA KVTMRIEPQV KLPTDTGASI YTEGLLGEQY VSIQPGGMPQ
DLQPGGTITM TQSAVNIDQL IGQMVFSKAS GK
|
|---|
| |