Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0337 |
Symbol | |
ID | 6876288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 318611 |
End bp | 319435 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642788210 |
Product | ABC transporter related |
Protein accession | YP_002218798 |
Protein GI | 198282477 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.425163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCTG AGGCTCTTGT CGAACTGGAA AACGTGCACT TTGCCCGGGG CCCGCACACG GTCCTGGACG GCGTGGGTCT GCGTATCACC CAGGGGGCCA TCGTATCTAT CATGGGGGCG AGCGGCGGTG GCAAGACGAC CCTGCTCAAC CTGATGGCCG GTACCCTCGC GCCACAGGCC GGGCGAATAC GAGTGGCGGG TCAGGATCTG CAGGCTCTGA ACTTTGAGGA CCTGTACCGT CTGCGTCGAC GTATGGGCAT GCTTTTTCAG CACAGCGCCC TGTTTACGGA TTTCAGCGCC TTTGAGAATG TCGCCTTTCC CCTGCGCCGC CACTTCCGGC TGGACGAGAG CGTTCTGCGC AAGCTGGTGC TGATGAAACT GGAGGCGGTG GGGTTGCGCG GAGCGGCCGG ATTGATGCCC GCCGAGCTCT CCGGTGGCAT GGGTCGGCGG GTGGCGCTGG CTCGTGCCAT GGTGATGGAC CCGATGCTGA TTTTTTACGA TGAGCCGTTT ACCGGCCTGG ACCCCATCAG TGTGGGGATT ATTGCGACCC TGATCCGCCG CCTCAATGAC GCCCTTGGCG CGACGAGCAT CCTCGTCAGC CACGATGTGC AGGAGACTTT TTCCATCGCG GATTACGGTT ACATCCTCGC GGGCGGCAAA ATCATTGCCG AAGGTACGCC AGATGCCCTG CGGACCAGTG ATTCGGAACT GGCACGGCAG TTTCTCGGGG GTAAGCCCGA TGGGCCGGTT CCCTTCCACT ACCCGGCGAA AGATGACTAT GCTACTGCCC TGACCGGGGT ATGGGCAGCG GGCGAGGCGA TTTAA
|
Protein sequence | MAAEALVELE NVHFARGPHT VLDGVGLRIT QGAIVSIMGA SGGGKTTLLN LMAGTLAPQA GRIRVAGQDL QALNFEDLYR LRRRMGMLFQ HSALFTDFSA FENVAFPLRR HFRLDESVLR KLVLMKLEAV GLRGAAGLMP AELSGGMGRR VALARAMVMD PMLIFYDEPF TGLDPISVGI IATLIRRLND ALGATSILVS HDVQETFSIA DYGYILAGGK IIAEGTPDAL RTSDSELARQ FLGGKPDGPV PFHYPAKDDY ATALTGVWAA GEAI
|
| |