| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0336 |
|---|
| Symbol | |
|---|
| ID | 6876287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 317890 |
|---|
| End bp | 318291 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642788209 |
|---|
| Product | S-adenosylmethionine decarboxylase proenzyme |
|---|
| Protein accession | YP_002218797 |
|---|
| Protein GI | 198282476 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1586] S-adenosylmethionine decarboxylase |
|---|
| TIGRFAM ID | [TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.387157 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCAT TGGGACATCA AATCGTTGCA GATTTTTATC ACTGTGACGG CAGTACCTTG
TCTGATGTTG ATTTTGTTAC GGATGCCATG CTCGAGGCCG CCCGGCGTGC CAACTGCACC
ATCGTGACGC AAACTTTTCA CCACTTCTCA CCCTACGGGG TAAGCGGCGC CGTTATCGTC
GCCGAGTCGC ATCTGGCCAT TCATACCTGG CCGGAATATG GTTACGCAGC GGTGGATGTT
TTCACCTGCG GCGATATCAT CCAGCCCGAG GATGCCTTGA ATTATCTCAA GGAAGCCTTT
GGCGCCGGGC AAGTCTCCAC CATGGAGATG AAGCGCGGGC AAGTGGATAT GATGGGCGTT
CCTGCCCATG AGTTGCGCGT CAAGCCGGCT CTCTGCGCTT GA
|
|---|
| Protein sequence | MRSLGHQIVA DFYHCDGSTL SDVDFVTDAM LEAARRANCT IVTQTFHHFS PYGVSGAVIV
AESHLAIHTW PEYGYAAVDV FTCGDIIQPE DALNYLKEAF GAGQVSTMEM KRGQVDMMGV
PAHELRVKPA LCA
|
|---|
| |