| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0333 |
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| Symbol | |
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| ID | 6876284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 315478 |
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| End bp | 316134 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642788206 |
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| Product | major intrinsic protein |
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| Protein accession | YP_002218794 |
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| Protein GI | 198282473 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.881895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.131198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCTCAA TAAGTCGGAA AATGGCGGCA GAGTTCATCG GTACCTTCGG GCTCATATTT
TTTGGTGGCG GTGCCGCGGC AATGGGTTAT CCTCTAATCG ATGTGGCCCT GGCCAACGGA
CTGGCCATTA TGATCGCTGC GTATGTGTTT GGTGATATCA GTGGTGGCGT GGTCAACCCC
GCGGTCACCC TTGGCGGGGC CATTGCAGGA AAGATAGGCT GGAAGGATGC CGGCCTGTAT
ATGGTCGCCC AGGTTGGGGG CGGCATCGCG GCCGGTTATG TGCTTCTGGT GGTTCTTGGT
GGATCGACAG GACATCTTGG GGCCACTACC ATCAATACCA GCCTTGTATC GGTCTCTGGC
GGTTTTATAC TGGAAGCCTT GGGAACATTT TTCCTGACCA CTACCGCGTT GTATACGGCC
ATGAGCGGTC GTACCGGTAA CGCTGCTCCT CTCGCTATCG GTTTTACCTT GGTCATGGCG
GTGACATTTA TGGGGCCGCT GACGGGAGCA AGCCTGAATC CCGCGCGGAC ATTGGGTCCG
GCCGTCGCTG GTGTCTACTT CCCGCACATA TGGGTGTATC TCGTTGCGAC GCCGGTGGGC
GGGCTGATCG CCGGATTGCT CTACAATTTC ATGCAGGAGC ACAAGGCTGT TTCCTGA
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| Protein sequence | MCSISRKMAA EFIGTFGLIF FGGGAAAMGY PLIDVALANG LAIMIAAYVF GDISGGVVNP
AVTLGGAIAG KIGWKDAGLY MVAQVGGGIA AGYVLLVVLG GSTGHLGATT INTSLVSVSG
GFILEALGTF FLTTTALYTA MSGRTGNAAP LAIGFTLVMA VTFMGPLTGA SLNPARTLGP
AVAGVYFPHI WVYLVATPVG GLIAGLLYNF MQEHKAVS
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