Gene Lferr_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0331 
Symbol 
ID6876282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp313968 
End bp314345 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content60% 
IMG OID642788204 
Productprotein of unknown function DUF423 
Protein accessionYP_002218792 
Protein GI198282471 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.120447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATCGC AGACGGACAA ATGGTTCCTT GCCCTGGGCG CCGCCAACGC GGGGACTGCG 
GTAGTGCTGG GGGCCTTCGG CGCCCACGCC CTGAAAGACC GCTTATCACC CAAAATGATG
AGCATTTACC ATACCGGTAG CCAGTATCAC CTCTACCATG CCCTGGGACT GATGCTGGTG
GGAGTGGTGG CGCTGCAACT GCCGGAATCC GGCCTTACGC AATGGTCAGG CTGGCTTATG
CTGACCGGGA CGGCGTTATT TTCGGGCAGT CTTTACCTTC TGGCGATCAC CGGCAAGGGT
TGGCTTGGCG CCGTCACGCC CGTCGGTGGG CTGTCGCTCA TTTCTGCATG GATATTGTTG
GCTGCGGGCG TGTTATGA
 
Protein sequence
MISQTDKWFL ALGAANAGTA VVLGAFGAHA LKDRLSPKMM SIYHTGSQYH LYHALGLMLV 
GVVALQLPES GLTQWSGWLM LTGTALFSGS LYLLAITGKG WLGAVTPVGG LSLISAWILL
AAGVL