| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0328 |
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| Symbol | |
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| ID | 6876279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 311211 |
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| End bp | 312209 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642788201 |
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| Product | integrase family protein |
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| Protein accession | YP_002218789 |
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| Protein GI | 198282468 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.133269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACG TGACCCTGCT TGGCCCCTGG ATACGGCGAT TTCTACTGGA GTATCTGGTA
CGAGAGCGCA ATCTTTCGAT AAATACCCAG CGCAGCTATC GAGATATGCT GTCCCTTTTT
CTGCCCCACG TGAGTAAACA ACTCAACAAA TCCGTGGACC GATTAACGGT ATCTGATCTG
TCGGCAGACC TTATCCGTCA ATTCCTTAGT GATATTGAGG AAAGCCGCCA CTGTCTCGCC
GCCACCCGCA ATCAGCGCCT CGGCGGCCTG CACGCGTTGG CTCGATTCAT TGGTGAAAAT
AGTCCTGAGC ATATCGAGTG GTGTTCACAA ATCCGGCTGA TTCCTTTTAA AAAAACGGCA
TATCCAGGCA TTACCTATCT CGAAAAGCCA GAAATGGACG CCCTTTTAGA ATCTCCAGAT
CGCCAGACCC CTCAAGGCCA ACGTGATTAC GCCTTATTAC TGTTTCTCTA CAACACTGGG
GCGCGTGCCA GTGAAGCTGC CGATCTCAGG ATCGTTGATG TGGATTGGCA TGCTCAATGC
GCCCACATTA TCGGCAAAGG TAACAAGCGG CGTACCTGTC CATTGTGGCC GACCACTCTG
GATCAATTGC GTGCGCTAGC AACGCAACGT GGGTTGGATC AACGAGTTTT TTTAAATCGC
AACGGCCAAC CCATCACACG CTTTGGTATC CATACGATGG TCGAACGACA TGCTGCTAGG
GCTTGTGTGC AAGTGCCATC AATGAGTACG AAGCAGGTCA GTCCACATGT GATCCGCCAC
AGCACGGCAA CCCACCTTTT ACGTGCTGGC GTGGACATCA ATACCGTCCG AGCCTGGCTG
GGACACGTTT CGCTCACTAC GACCAACATC TACGCTGAGA CTGACCTCGA GACTAAAACT
CGTGCGTTGG CGACATGTGC TCCGCCCACA GCAGAGGGGA TGGCAACGAA ACATTGGCGT
CAGCAGCCGG ACCTGATGGC CTTCCTCCAC GGCTTATAG
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| Protein sequence | MTDVTLLGPW IRRFLLEYLV RERNLSINTQ RSYRDMLSLF LPHVSKQLNK SVDRLTVSDL
SADLIRQFLS DIEESRHCLA ATRNQRLGGL HALARFIGEN SPEHIEWCSQ IRLIPFKKTA
YPGITYLEKP EMDALLESPD RQTPQGQRDY ALLLFLYNTG ARASEAADLR IVDVDWHAQC
AHIIGKGNKR RTCPLWPTTL DQLRALATQR GLDQRVFLNR NGQPITRFGI HTMVERHAAR
ACVQVPSMST KQVSPHVIRH STATHLLRAG VDINTVRAWL GHVSLTTTNI YAETDLETKT
RALATCAPPT AEGMATKHWR QQPDLMAFLH GL
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