Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0311 |
Symbol | |
ID | 6876261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 296660 |
End bp | 297790 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642788183 |
Product | lipopolysaccharide heptosyltransferase II |
Protein accession | YP_002218772 |
Protein GI | 198282451 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000028657 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCCGAGC AACGACCAAA GTTGCAGGAC GATCCCGATG CACACGATGC CGGTACAGCA GAACCGCCCT GTAACGAACA TGAAGCCTTT GTTCCGCACA ACACCCGCAT TGCCCACAGC TACGATCCCG CCCGCCTGCT GCTGATCGGT CCGGCCTGGG TGGGGGATAT GGTCATGGCG CAGGTATTGT TGCAGGTACT GCGCCGTCGC TGGCCACGCC TGCAGGTGGA TGTCCTGGCG CCGCCCGCCA GCATTCCGGT GGCGGAACGC ATGCTGGAGG TGCGGCGGGC CATGCCCCTG TGCATCGACC ACGGTCAACT GGGGTTGCGT CTGCGGCGCC GGACCGCAGC GGAACTGCGC GCACAGAACT ATGACTGGTC CATCTGCCTG CCCAACAGCT TCAAATCCGC GCTGGTCCCT TATTGGGCAC ATATCCCGAC CCGCACCGGT TTCAGCGGCG CGGGGCGCCG TTTGCTCCTG AACGACCGCC GTCGCTTGAA CAAAAAGAAA CTGCTGCGCA CCGTGGACCG CTTCGTTGCC CTCGGACTGC CGCTACGCCT TCCACAACCC ACGCAACTGC CCGCCCCCCG TTTACAGGTA AACCGGGCGG CCCTTGCCGC GACCCTGCAG CGGCTGGGCA TAAGCCCACC ACAACAGCCC TTGGTCGCCC TGGCACCCGG TGCCGAATAT GGTCCGGCCA AGCGCTGGCC GGTGCACCAC TGGAGTACCC TGGCCCAAGC CCTTATCGAA CGCGGCTATG CCGTGTGGAT TTTCGGCAGC CCCAAGGATG CAGAAATCAC TCGGGCCATA GCGGCGGTCG TCCCGGAAGC CCTTGACCTG GGGGGCCGGA CCACTCTGTT GGAAGCTCTG GACCTGCTGT CGCTCGCCCC CCTGACGGTC AGCAACGACT CTGGTCTGAT GCACGTGGCA GGGGCTGTCG GCAGCCGGGT CATCGCGCTC TATGGCTCCA CACCCCTCAG CATGACCCCC CCCCTCTCCG CCGGGGCGCA GGCTCTACGC ATCGACCTGC CCTGCAGTCC ATGCGGAAAG CGCGAGTGTC CACTCCGACA TCACCGCTGT ATGGAAGATC TCAGGCCGGA ATACGTTCTC CGCCAGATCT TCGGGATATA G
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Protein sequence | MAEQRPKLQD DPDAHDAGTA EPPCNEHEAF VPHNTRIAHS YDPARLLLIG PAWVGDMVMA QVLLQVLRRR WPRLQVDVLA PPASIPVAER MLEVRRAMPL CIDHGQLGLR LRRRTAAELR AQNYDWSICL PNSFKSALVP YWAHIPTRTG FSGAGRRLLL NDRRRLNKKK LLRTVDRFVA LGLPLRLPQP TQLPAPRLQV NRAALAATLQ RLGISPPQQP LVALAPGAEY GPAKRWPVHH WSTLAQALIE RGYAVWIFGS PKDAEITRAI AAVVPEALDL GGRTTLLEAL DLLSLAPLTV SNDSGLMHVA GAVGSRVIAL YGSTPLSMTP PLSAGAQALR IDLPCSPCGK RECPLRHHRC MEDLRPEYVL RQIFGI
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