Gene Lferr_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0307 
Symbol 
ID6876257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp293188 
End bp294030 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content54% 
IMG OID642788179 
Producthypothetical protein 
Protein accessionYP_002218768 
Protein GI198282447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000284732 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000657786 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTTTATCA AAAACCGCAT TGTCATCGCG ACGGTCGCCG TCCTGTGTGG CGTCAGTGTC 
TCAGCCCAAG CCGAAACGCT GACCGATTTC TTTAAGCAGA GCAAGATCGA TGGCCAGATC
CGCTCTTATT ACTTCAGCCG GGATTATGGC GCAACCGGAC CCAATACCTA CAATCAGGAC
GTCTTTAGTC TGGGGGGCAT GCTGAATATC AAGACGGCAC CTTTTCTGGG CGGCTTTGGT
GTAGGCGTCA GTTTCTTTGC CGCGCACGGA CTCGGAGCGA ATGATACCAG TGGCGGGCCG
GCCTACCCAC ATCTGGATGC GACGGTGATG GGTCCGCAGT CCATCGATGC CCTGGGGCAG
GCTTACCTCC AATATGAGAT TCCAAAAACG CTGTTGATCC GGGCGGGCGA TCAGGAGTTG
GATACGCCCT GGATGAACGG CTCAGATTCG CGCATGTTGC CCGCCACATA TCAGGGTGTG
TTTGCCGACA TTTCACCCTA TCACGATTTA CACCTGTATG GCATGCGTAT TTTCCGCTGG
AAGAGTCGCA CATCGAATAG TTATTACAAT GACAACCTGT TTTATTCCGC TAATTACGAG
GGGGATGAAC TGTACGGTGG TGGTACACAG TTGCCGACCA CCGCTCCCTC CACCAGTGGT
ACCCTGGCTT TTGGCGCCTC GTATTCCCTG ATGGGCGCCA AGGCGACTGC CTGGTACTAT
GATTTTTATC AATTCGCCAA GATGTTTTAT GCGACAGCGG ATTATACACT GAAAACCGGG
ACCGGGGTTG ATCCATTTGT GGGTGCCCAG TACCCAGGGC CCCGTCAAAG TCGCCTGATA
TGA
 
Protein sequence
MFIKNRIVIA TVAVLCGVSV SAQAETLTDF FKQSKIDGQI RSYYFSRDYG ATGPNTYNQD 
VFSLGGMLNI KTAPFLGGFG VGVSFFAAHG LGANDTSGGP AYPHLDATVM GPQSIDALGQ
AYLQYEIPKT LLIRAGDQEL DTPWMNGSDS RMLPATYQGV FADISPYHDL HLYGMRIFRW
KSRTSNSYYN DNLFYSANYE GDELYGGGTQ LPTTAPSTSG TLAFGASYSL MGAKATAWYY
DFYQFAKMFY ATADYTLKTG TGVDPFVGAQ YPGPRQSRLI