Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0293 |
Symbol | |
ID | 6876243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 277816 |
End bp | 278763 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642788165 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_002218754 |
Protein GI | 198282433 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.127138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCG TCACCGAGCC CCTGTTTCAA CGATTATTGG CGTGGTCGCC GTTCTCCGAG CATGAGTTGG TCGTGCTTAT CGCTACCGCG CCGTCGAGGT ACAAGGCTTA CTATATTGAG AAGCGAGGTG GCCGCGGACA GAGAGAGATT TCTCAGCCCA CAAAGGAGAT CAAGTTCTTG CAGCGCCTCC TTGCCAGTAA GGAACTCAGG GAACTACCGA TACATGACGT GGCAGTCGGG TATCGAAGTG GGCGGTCGAT CCTTGATCAT GCCCAACCGC ACGCATCTGC TCGATACTTG CTCAAGCTTG ACTTCACCAA CTTTTTTCCC AGCTTGAAGT CGAAGGCCCT CGATCATCGT CTTTCGCGAG ATACCGCGTA CTCCACGGCC GAGCGTTGGA TCCTCCGCAA CCTCTTGTGT CGGCGCACTC CTGGAACTGG CAACTATCAG CTTTCCATCG GCGCGCCTAG TTCTCCTCAT ATTTCGAACT ACTTGCTTTG TGAGTTCGAC CAGCTAATGA GCGACTACTG CGGGATCAGA GTGGTTCGAT ACACGAGATA CGCAGATGAC CTCGCGTTCT CCACGTCCAT ACCATCGGTG CTTAATGATA TAGAGACTGA AGTCCGTCGC CTGATCCAAG AGCTAGACTA TTTGGGGCTC TCGCTGAATG AGGCCAAGAC TATTAATGTA TCGACCAAGC ATCGGCGAAC ACTTGTAGGC CTTACGCTCT CCAATGACGG ACGTGCGTCA ATTGGACGCA TAGCAAAGCG AGAACTTCGC CAGGCAATCC ACAGTTTAAG GCATGGTTTG CTATCCCAGT CTGAGATCGC AAATCTTCGA GGGAGGCTTG CCTTCACCTA TGCGATTGAT CCTGAGTTTA TCGAACATCT CTTACATCGG TACGGATTTG AGTCAATTTC CACTATTGAT GGGCCTCAAA CAGATTGA
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Protein sequence | MSIVTEPLFQ RLLAWSPFSE HELVVLIATA PSRYKAYYIE KRGGRGQREI SQPTKEIKFL QRLLASKELR ELPIHDVAVG YRSGRSILDH AQPHASARYL LKLDFTNFFP SLKSKALDHR LSRDTAYSTA ERWILRNLLC RRTPGTGNYQ LSIGAPSSPH ISNYLLCEFD QLMSDYCGIR VVRYTRYADD LAFSTSIPSV LNDIETEVRR LIQELDYLGL SLNEAKTINV STKHRRTLVG LTLSNDGRAS IGRIAKRELR QAIHSLRHGL LSQSEIANLR GRLAFTYAID PEFIEHLLHR YGFESISTID GPQTD
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