| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0283 |
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| Symbol | |
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| ID | 6876233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 266349 |
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| End bp | 268403 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642788155 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_002218744 |
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| Protein GI | 198282423 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.860324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGT ACATCGCCGA GAAGCCCAGC CTGGGCAAAG GGATCGCCGA GTATTTGCCC
GGATCGAAGA GCAAAGGGAA CGGCTTCATC CAGTGCGGAG TGGATACCGC CGTGACCTGG
TGTTTCGGCC ATATATTCGA GCAGGAAGAG CCGGACTTCT ACACGCCTGA TGATGTTCCC
ACCACGCCAA AGGGCAAGAA GAAATGGCGC TTTGAGGAAC TGCCCATTTT TCCTGAGCAA
TGGAAGAAGC GGGCAAAAGA TGACGCCAAG GCCCAGATCA AGGTGATCCG GGACCTGCTC
AAGAAAGCGT CGTCTGTCGT CAACGCAGGA GACCCGGACC GAGAGGGCCA GCTGCTGGTG
GATGAGGTAC TGGAAGAGCT CCGCTGGAAA GGGCCTACGC AACGCATTTG GCTGGCCGCC
CTCGATGAGC AGTCCGTGCG CAAGGCGCTG GCCAGTCTGA AGGACAACCG GGACTATCAG
AATCTCAGCC ATTCTGCCGA GGCCCGCGCC CGCGCGGACT GGCTCATGGG CATGAATCTC
ACCCGCGCAT TCACGCTGCG CAACAGCGGC GCCGGAGTCG TCTCCGTGGG TAGGGTGCAG
ACGCCAACGC TGGCTCTGGT CGTGGCCCGT GACGAGAAGA TCGAGCACTT CAATCCGAAG
GACTACTACG TTCCGCGCAT CAACGCGGGC TTCTGGGCCG CCTGGGAGTT GCGGGAGGAT
TTCGAGGGTG TCGATGCCGA AGGCTACCTC ACCGACCGGA AAGCTGCTGA CCGGCTGGCA
TCCCGGGCCA AGGCGGAAGG CAAGGCGACG GTGAAGGACT TCACCAGCGC CGAAAAGCAG
CAGCAGGCCC CATTAGGCTT CTCCCTTGCG GAGTTGCAAA AGGTCTGCTC AGCCAAGCTC
GGCATGTCGG CACAAAATGT CCTTGATGCG GCCCAAGCGC TGTACGAGGA ACACAAGGCG
GCGACCTATC CGCGGACCGA TTGCCGCTAT CTACCGGAAG AACAGCATGG GGATGCCGGA
CAGATACTGT CCGGCCTGGC GAAAGCTGGA TTTGCGGATC TGGTGAAAGC CGCCGATTCC
AACCGGAAGT CGGCCATCTG GAATACGGGC AAAGTGACGG CGCACCACGC CATCATTCCG
ACCGGCTCCA TGCAGGGCTC CATGAGCCCG GCAGTGGCCA AGGTCTACGA GATCATCGTC
CGCTCCTATC TCGCGCAGTT CTATCCGCCC TATGTGTACC GGGCGATCAA GGCCCTACTG
ACTTGCACCG GCGAGGACTG GAAGGCGACT GCCAACATCC CGGTATCCGC AGGCTGGAAA
GCCGTGTATG GGATGACCGA TGACGATAAT GATGACACCC CCGCCCAGTC GATCCCGCCG
CTCAAAAAGG GACAGAGCCT GACGGTTCAG GATGCGGACG TGCAGGCAAG GCAGACCAAG
CCGCCGGCAC GATTTACGGA TGGATTGCTC ATTGAAGCCA TGAGCAACAT CCACAAGGTG
GTTGAGGACG AGGCCGCCAA GGCCAAGCTC AAGGAAACCT CTGGCCTAGG CACGGAGGCC
ACCAGGGCCA GCATCATCGA AACACTGCTA ACCCGGGGAT TCCTGGAGCG CAAAGGCAAG
CAGATTCTCT CCACGCAGGC CGGGCGGGCG CTGGTTCACG CGCTACCCAA AGACCTGACC
GATCCCGTCC TGACAGCCCG CTGGGAGGAT GCTTTGTCAT CCGTTTCCGA AGGCCGCGTG
ACGCTACAGC AGTTTGAGGA AGCGCAGCGT AAATTTGTTG TCCGCATGAT CGAGGCGGCC
AAGGCGACGA CAGTTGCTGT CGGCCAGGCA CGGCCATCTT CCGGCGCTGG TCGTGGCAAG
TCGTCTACCG GAAAAACGCG GGGCGGCGGA CAAAAGGCTG GCCCAGCCTG CCCGGACTGC
AAGAAGCTGA CCATCACCCT GAAGACGAAG AAGGGAAGTG CCTTCTTCAA GTGCGAGGGC
TGCCAGTCCT GCTGGTGGCC GGACAAGCAG GAACCCAAGA AGCTCGGAAC GAAGTGGGGT
GAGAAAAAAA CATGA
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| Protein sequence | MKLYIAEKPS LGKGIAEYLP GSKSKGNGFI QCGVDTAVTW CFGHIFEQEE PDFYTPDDVP
TTPKGKKKWR FEELPIFPEQ WKKRAKDDAK AQIKVIRDLL KKASSVVNAG DPDREGQLLV
DEVLEELRWK GPTQRIWLAA LDEQSVRKAL ASLKDNRDYQ NLSHSAEARA RADWLMGMNL
TRAFTLRNSG AGVVSVGRVQ TPTLALVVAR DEKIEHFNPK DYYVPRINAG FWAAWELRED
FEGVDAEGYL TDRKAADRLA SRAKAEGKAT VKDFTSAEKQ QQAPLGFSLA ELQKVCSAKL
GMSAQNVLDA AQALYEEHKA ATYPRTDCRY LPEEQHGDAG QILSGLAKAG FADLVKAADS
NRKSAIWNTG KVTAHHAIIP TGSMQGSMSP AVAKVYEIIV RSYLAQFYPP YVYRAIKALL
TCTGEDWKAT ANIPVSAGWK AVYGMTDDDN DDTPAQSIPP LKKGQSLTVQ DADVQARQTK
PPARFTDGLL IEAMSNIHKV VEDEAAKAKL KETSGLGTEA TRASIIETLL TRGFLERKGK
QILSTQAGRA LVHALPKDLT DPVLTARWED ALSSVSEGRV TLQQFEEAQR KFVVRMIEAA
KATTVAVGQA RPSSGAGRGK SSTGKTRGGG QKAGPACPDC KKLTITLKTK KGSAFFKCEG
CQSCWWPDKQ EPKKLGTKWG EKKT
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