| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0262 |
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| Symbol | |
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| ID | 6876212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 248675 |
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| End bp | 251104 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642788138 |
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| Product | TRAG family protein |
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| Protein accession | YP_002218727 |
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| Protein GI | 198282406 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.963876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAACA GTATCCATGC TCCCAACTCC ACCGTCTCAG ACTATAAGAT CCAGCGCCTC
GCCCGGGGCG GCAGGCTCAA GACGACGCTC GCCGGTGTTG CGGCGGGCGT TCTCGGTTAC
ACGCTAGGCA TATCCTATGT GGCTCGGGAC GTGTTTCCCG GCTACCAGTG GACCGATGAT
TTCATCCAGA AGGCGCATGC CTACATCGCA TTGCCTTACG GCTGGCGTCT GTATGATCCA
CTGCCGTTCC TGCGCCCCAT GATCCTGAAC ATCCATTATC CGGTGATTCA TCAGGCATTC
TATGACGCCG GTCTGCCGGC CGTGGTGCTG GGCATGCTCA CGGCGGGGAT ACTCGGGAAA
AAGCACAAGG ACGCGCAAAA AGCCGTCCTG GACAATCCTG TGCATGGCTC AGCTCGTTGG
GCGGGTAAGA GCGACGCGAT CCGGGCGGCG CTCTTGCCCT CTCCCCCGCC AAAGACGGTA
ATGGACTCCC TGCGCCCCTG GCTTGGCTTG CACCCTGCGA AGGGCTTGCA CCCTGCGAAG
GGGCTCAAGG GAGATTCCGA CTGGGTCCGC TGGCAAGAGC GGCGGGAAAA GCGGAAAAAG
GAGGCCGCCG AATGGCGGAA GAAGAAGGCG GAGAAGGAGA AGAAACGCCT GTCAGAGATC
CCGGAACCGA CGGTTTTTGA CCGGTTCGAC TCCCCCCATG TCTGCTATGT GGGAGCCTTC
GTCGAGAACG GGGTGGCCAC TCCACTCCAG CACACCGGGG CGGAACACAT CCTGGTCTTC
GCCCCGACCC GATCGGGCAA GGGCGTTGGC CTGGTTTTGC CCACATTGCT GGACGGCTGG
ATGGACTCGG TGGTCGTGCA TGACATCAAG GGGGAAAACT TCAACCTGAC GGCGGGATAC
CGCAAGGCCA TGGGCCACCA CATCCTGAAG TTTTCACCAG GCTCGGTATC CGAAGAAGGT
TGTCACTTCA ACCCGCTGGA TGCGGTGCGT GTCGGAACCC AATACGAAGT CAAGGACGTG
ATGAACATTG CCACGATGAT TGTGGACCCG GATGGCAAGG GCCTGAACGA TCACTGGCAG
AAAACAGGCT TTGCCCTGCT CACGTCCATC ATCCTGCATG TGCTCTACGC CATGCCGGAC
AAGACCCTGC GGGGCGTTGC CGCCTATCTC AACGATCCTA CGCTGGAAAG CGTGGACGTA
GCCTTTGAGC GCATGATGCA GACGGAGCAT GACCCGGATG AGCAATATGG CTGGAGGGAC
GGCAACGGCC AGTTCACCAA AGTGCATCCG GTCATCGCGC AATCCGCGCG GGAGATGCTG
AACAAGGCCG AGAATGAAAA ATCGGGCGTC ATTTCGACCA TGATGAGCTT CCTGTCCCTC
TACCGGGATC CCATCGTCGC GAAGTGGACC GAGTATTCGG ACTTTCGCAT TGCCGACCTT
CAGGACGCCG AACAACCCGT CTCTCTGTAC CTGGTCACCA GTCCCGAAGA CAAGAACCGG
CTCAAGCCCC TCATTCGCCT CGTGCTCAAC CAGATTGCCT CCCAGTTCAC CGCGGAAGAA
CGCCTGGAAG CGAAAGACGG GCGAATCGTC GCCAAGGGAA AGCATCGGCT GCTCCTGCTG
CTCGACGAGT TCCCGAGCCT GGGCAAGCTG GACGTCTTCC TGGACAGCAT CGCCTTCCTC
GCAGGCTACA ACGTCAAGCT GTACCTCATC ACCCAGGACA TTGCCCAGCT GGAAGATGAA
GGCCACGGCT ACGGCAAGGC CGGGGCCAAG ACCATCATCG GCAACTGCCA CATCCGGGCG
GCCTACGCGC CCAACCAGGT GGAGACGGCC AAGTGGATCT CTGACATGCT GGGCACCCGT
ACCGTGACCA TGGAAAACGA CAACCAGAGT TTTGACGGCT CCCTGTTCGG TCAGAACAAG
GGCTATTCGA CGAGCCTCAG CTACCAGTCC CGCCCCCTGC TGACGGCGGA TGAGGTCATG
ACCTTGCGGG GACCGGAAAA GGAAGGCTCC AATATCAAGA CCCCGGGCGA TATGCTGGTA
TTCGCGGCAG GCTTCCACCC CATTTATGGA CAGCAGCTGC TCTATTTCAA GAATCCGGAA
TGGCTCGATC GGGCATCCGT TCGGTGGCCA GAGAAGAGCG ATTCCATCCC CGGAGCCAGG
AAAGACTACA AGGCCATTCT GGGTGAGTCG GGTGGAACGC TACCCATCCC CCATATCGAG
AAAAAACCGG AAGGGCAGGA TCCTGTCGAG GAAGTGAGCG AGGCTGAAAG GGCGGCATTG
GCCGCGGCGG CTGGCGATCT GGACGCCGTG GCAGGAGAGA AGCCCTTCGC TGGGTGCAAG
CCCACGGGGG ACGGGAAATA TGACACGTCC GAGCGGGACG CGGAGAGATG CGTTATCGGG
GGGTTGATGG GGGATGACGG CGACGGATGA
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| Protein sequence | MVNSIHAPNS TVSDYKIQRL ARGGRLKTTL AGVAAGVLGY TLGISYVARD VFPGYQWTDD
FIQKAHAYIA LPYGWRLYDP LPFLRPMILN IHYPVIHQAF YDAGLPAVVL GMLTAGILGK
KHKDAQKAVL DNPVHGSARW AGKSDAIRAA LLPSPPPKTV MDSLRPWLGL HPAKGLHPAK
GLKGDSDWVR WQERREKRKK EAAEWRKKKA EKEKKRLSEI PEPTVFDRFD SPHVCYVGAF
VENGVATPLQ HTGAEHILVF APTRSGKGVG LVLPTLLDGW MDSVVVHDIK GENFNLTAGY
RKAMGHHILK FSPGSVSEEG CHFNPLDAVR VGTQYEVKDV MNIATMIVDP DGKGLNDHWQ
KTGFALLTSI ILHVLYAMPD KTLRGVAAYL NDPTLESVDV AFERMMQTEH DPDEQYGWRD
GNGQFTKVHP VIAQSAREML NKAENEKSGV ISTMMSFLSL YRDPIVAKWT EYSDFRIADL
QDAEQPVSLY LVTSPEDKNR LKPLIRLVLN QIASQFTAEE RLEAKDGRIV AKGKHRLLLL
LDEFPSLGKL DVFLDSIAFL AGYNVKLYLI TQDIAQLEDE GHGYGKAGAK TIIGNCHIRA
AYAPNQVETA KWISDMLGTR TVTMENDNQS FDGSLFGQNK GYSTSLSYQS RPLLTADEVM
TLRGPEKEGS NIKTPGDMLV FAAGFHPIYG QQLLYFKNPE WLDRASVRWP EKSDSIPGAR
KDYKAILGES GGTLPIPHIE KKPEGQDPVE EVSEAERAAL AAAAGDLDAV AGEKPFAGCK
PTGDGKYDTS ERDAERCVIG GLMGDDGDG
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