| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0261 |
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| Symbol | |
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| ID | 6876211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 247987 |
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| End bp | 248664 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642788137 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002218726 |
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| Protein GI | 198282405 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.385484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCCAC TATCCCAGAT CAGTGCGGAA TGCGCCCCCA TGGTTGCACG CTCGACGATG
GCCGCCATTG TGCGGGTGGA GTCCGGGGGC AACCCGTTGG CGATGTGGAA CAACAGCACG
CGGAGCATGG TCATTCCCTG CAGTCGGGCT CAGGCCATCC AGTATTTGCG GAAAGCCATG
GCCGCTGGCC AGCGGGTCGA CGTAGGGCTG GCCCAGGTGG ATACCGGGAA CTTCTCAGCC
TTCGGGCTCA CTCCCAGGAC AGCCTTCAAT GCCTGCACCA ACCTTCGGGC AGGCAGCGAG
ATCCTGCACA TGGATTGGCA ACAGGCGCGG GAGAATGGCT ATCGGGGCCA ACAAGCGCTC
TACCATGCCT TTGAAGCGTA CAACTCCGGG CGGCTCCGGG GCGATGCCCA ATATGCCAAC
CGGATACTGG GCGCCGCTGG AGTATTCGCG CCTGCCGGCC GCAAGCCTGC CGGCCGCAAG
CCCGCCGGCC GCAAGCCTGC CGACTACGGC GGACTGCGCA CCATCTCCCA GGTCAATGCG
GCACTGCCGA CCAATCCCTT TCCTCAATTT CGGTGGCTTG CCGCCGGCGG GCTTGCAGCC
GACGGGCAGG CAAAATCGGT TCAGGCGGTA ACCACCGGAC CATCAGATGA CTCCCACTCC
TGGCCGGTTC TCCCATAA
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| Protein sequence | MIPLSQISAE CAPMVARSTM AAIVRVESGG NPLAMWNNST RSMVIPCSRA QAIQYLRKAM
AAGQRVDVGL AQVDTGNFSA FGLTPRTAFN ACTNLRAGSE ILHMDWQQAR ENGYRGQQAL
YHAFEAYNSG RLRGDAQYAN RILGAAGVFA PAGRKPAGRK PAGRKPADYG GLRTISQVNA
ALPTNPFPQF RWLAAGGLAA DGQAKSVQAV TTGPSDDSHS WPVLP
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