| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0259 |
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| Symbol | |
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| ID | 6876209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 246268 |
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| End bp | 247677 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642788135 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_002218724 |
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| Protein GI | 198282403 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.089272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCG GCAAAGACTT TTTCTCCGAT TTGCTCCAGA AAAAGAAAGG GCTGCCGCCT
GCAAGGCAAC AGCCCGCCGT GGATAGCAGC AAAGGCCCTG GCGGGCAGCA AGGCCCTGGC
AAACAGCAAG GCCCACAAGC CAGTCAACCC GGGATAGAGG TCAAGCCGGA CAGGGACCGG
ATGGCGACGC GCATCAAGCG GACGCCCCTC TATATCGCGG CTGCGGTGGT CGGACTGGGC
GCCTATGGCG GCTATGAGTA TCTGCAAAGT CATCCGATGT TCGGGAACGC CAGGCCACAG
GCGCAGACCA AAACCATCCA GCCGGCGAGC GGGACTGGCG CACCTGTCGC CCCGGCGCAC
CGGAAGCAAT ACCACAAGCC AACCGCTCCT GGAGGGGCAT CGGGCACGTC GGCAACCGCG
GCCACGAACA GTGCGGGTGG ACCGTCCCAT CCAACGCCCG CCCCAGCGTC CACAGGACCC
AAAAAGAATC CCTACGCAGC GCAGGACGCC GCCTTCGCGT CCGCACTGGG GACGGGAAGC
GCCGGGAGCG GAGCCGGTGA GGGCCTTGCC TGGAAAACGC AGGAGTCAAC GCCGTCCGCG
CAGGCCCCGA CAGTTCTCCC TACGGCCCTG CCGGGAGCAT CCCTGCCGGG CGCGGAACAG
TCGGCAGCGA AGAAAACAAA GAAGAAGGCC CCGCCGCCCC TGGTGACACG GGAGACGAGC
CCTTACGAGA TTCTTTCCGG ATCGGTCATT CCCGCCGTTT TGCAGGCGGG CATCAAGAGC
TATCTGCCGG GAGAGATCAC GGCGGTGGTC AGCCAGAATG TCTATTCGTC CGTGAACGGG
GCAACGCTCC TGATCCCTGC CGGCGCCAGG CTGGTAGGCA CCTATGATAC ACAGACCGCC
CTGGGCATCA ACCGGCTGGC CGTTGCCTGG ACACGCATCG AGTTTCCGAA CGGCACCACC
ATGAACCTGC CTGGATACGA AGGGGCAGGC GGTGCTGGAT ACGCAGGCTT CGCCGGGGAG
GTCAATGACC ACACCTGGCT GATCTTCAAG AATGCGTTAT TGATGTCGAT CGTGGATGCA
GGGATGGCGA TTGCCTCTCC GTCCACTTCA ACCAGTGTGA CAGGCCAGAT GTCCGGGAAT
GTGGCTCTTC AGGATAGCGA GCAATCCCTG GCGCAGACCT TTGGGGAAGC CGAATCCCAG
CTGTTGGGAA AGTACATCGA CATAGCACCC ACGATCACCA TTCCCACCGG CTATCTGTTC
TCGGTGGTGG TGGCGCATGA CATGGTCTTC CCCGGCCCCT ACGACCCGGC CATGCAGACG
GGATCGGCCA TGGTCGACCC GGCGCTTGGG CCGAATCTCA ATCCCTATGG GTTGCGCCCT
GCGAAGGGGT TGCACCCTGC GAATGGGTAA
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| Protein sequence | MKSGKDFFSD LLQKKKGLPP ARQQPAVDSS KGPGGQQGPG KQQGPQASQP GIEVKPDRDR
MATRIKRTPL YIAAAVVGLG AYGGYEYLQS HPMFGNARPQ AQTKTIQPAS GTGAPVAPAH
RKQYHKPTAP GGASGTSATA ATNSAGGPSH PTPAPASTGP KKNPYAAQDA AFASALGTGS
AGSGAGEGLA WKTQESTPSA QAPTVLPTAL PGASLPGAEQ SAAKKTKKKA PPPLVTRETS
PYEILSGSVI PAVLQAGIKS YLPGEITAVV SQNVYSSVNG ATLLIPAGAR LVGTYDTQTA
LGINRLAVAW TRIEFPNGTT MNLPGYEGAG GAGYAGFAGE VNDHTWLIFK NALLMSIVDA
GMAIASPSTS TSVTGQMSGN VALQDSEQSL AQTFGEAESQ LLGKYIDIAP TITIPTGYLF
SVVVAHDMVF PGPYDPAMQT GSAMVDPALG PNLNPYGLRP AKGLHPANG
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