| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0254 |
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| Symbol | |
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| ID | 6876204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 241275 |
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| End bp | 242114 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642788130 |
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| Product | TIR (Toll-Interleukin 1-resistance) domain containing protein-like protein |
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| Protein accession | YP_002218719 |
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| Protein GI | 198282398 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4916] Uncharacterized protein containing a TIR (Toll-Interleukin 1-resistance) domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCAT CCGACCAGTA CCAGTCGTTC ATGATTGGGG TAATTGGGGA TGACAATGGG
CGTGTTATAC TGCAACTTGG AATGTTACGC TGCTCCGTTA GTGCAATCGA ATTTACGTTA
TTCCTAAAGG AGTTAGCTTT GTACAAGTAT GATTTTGGAC TCTCTTTTGC CGGAGAGGAT
CGTGAGTACC CAGAAAAGCT TGCGCGACTC CTTAAGGATG AGCATGTCCG AGTTTTCTAT
GACCGCGAAG AAGAAGCAGA CCTTTGGGGA CAGGATCTAT ATCAGGGGTT TCAGAAAGTC
TACGGTCAAG AATGCCGTTT CTTCATTCCA TTTGTTTCGG CCAATTACAT CGTCAAGAGG
TGGCCAAGAC ATGAACTTAA GCAAGCCCAA GCCAGAGACT TTAAATCCAA CGTCGAGTAC
ATCCTACCGC TACGACTTGA TGATACTGAA CTGCCGGGCA TCAATGACAC AACCGCTTAT
ATTGACCTTC GGGATCGATC TATTGAGGAC GTCGCTCAAC TCTGTCTAGG TAAGCTGGTT
CGTGATTCGG CAATTCGACA GTTGTTCATA TTCCTCAGAG AGAACAATCC CGCTTCGATA
AAGCTGCTCG ATAGCAGGCC AGCGACACTG CTGATCCGTG TCGCAACATC TAAAGCTTCG
TCGTTTGAGA GGATTTTTGC CCAGATCGCC CCGCAGGTTT GTAGATGCAC GGATCACCAC
AACACATTTA TTAATGGTGG ATATGGGCCC GCTGGCTGCA TCCCCAGTGT CGATGCAGAA
CCGCATACAA CCTTCTTCTT GATTCTCTCC GAGAACTTCT ATGCCGAAAT CATGATATAA
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| Protein sequence | MTSSDQYQSF MIGVIGDDNG RVILQLGMLR CSVSAIEFTL FLKELALYKY DFGLSFAGED
REYPEKLARL LKDEHVRVFY DREEEADLWG QDLYQGFQKV YGQECRFFIP FVSANYIVKR
WPRHELKQAQ ARDFKSNVEY ILPLRLDDTE LPGINDTTAY IDLRDRSIED VAQLCLGKLV
RDSAIRQLFI FLRENNPASI KLLDSRPATL LIRVATSKAS SFERIFAQIA PQVCRCTDHH
NTFINGGYGP AGCIPSVDAE PHTTFFLILS ENFYAEIMI
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