Gene Lferr_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0229 
Symbol 
ID6876179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp216318 
End bp216692 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content53% 
IMG OID642788105 
ProductPilT protein domain protein 
Protein accessionYP_002218694 
Protein GI198282373 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTCTGG TCGATACCTC CGTCTGGATC GACCATTTCC GCTCTGGAGA TGCACACCTC 
TCTACTCTGC TTGATCATGC CATGGTGCAA ACGCACGATT TCATCATCGG AGAAATCGCT
TGCGGGAATC TCAAAAATCG GCAACAGACC TTATATCTGC TCTCATGTTT ACCCCGATGC
ACCGCCACCT CTCCAGAAGA AACCCTGTTT TTCATTGGGC GTCATGGACT GATGGGACGC
GGTATAGGCT ATATTGACGC GAGTATCCTA GCCTCCGCCA TGCTCGTGCA GGCCAATTTA
TGGTCCCGCG ACAGACGTCT CATGGCTCTG GCTACCGAAC TTGGCTGCGC GTACTCACCG
ACAGCATCCG AATAG
 
Protein sequence
MILVDTSVWI DHFRSGDAHL STLLDHAMVQ THDFIIGEIA CGNLKNRQQT LYLLSCLPRC 
TATSPEETLF FIGRHGLMGR GIGYIDASIL ASAMLVQANL WSRDRRLMAL ATELGCAYSP
TASE