| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0228 |
|---|
| Symbol | |
|---|
| ID | 6876178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 214762 |
|---|
| End bp | 216216 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642788104 |
|---|
| Product | N-6 DNA methylase |
|---|
| Protein accession | YP_002218693 |
|---|
| Protein GI | 198282372 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAGC AGGCTTTCAA GAATATCGAT GACATCCTCC ACAAAGATGC AGGCTCCTCC
AGCGAACTTG ATTACACCGA ACAGACGTCC TGGCTGCTTT TTTTAAAATA CCTGGATGCC
CTGGAGCAGG ACCGAGCCAT GGAGGCGGAG CTGGAAGGCC GTCCCTACAC CTTCATTTTG
GAGGATGCCT TCCGCTGGGA GCATTGGGCG GCGCCCAAAA CGGCAGATGG CAGGATGGAC
CACCACAAGG CCATGTCCGG GGACGACCTC CGGGATTTTG TAAATATCCG GCTGTTTCCC
TATCTGTCAG GCTTCAAGCG CCGTGCTACT GGTTCCAACA CCATCGAGTA CAAGATCGGT
GAGATCTTCA GCGAGATCAA AAACAAGATT CAAAGTGGCT ACAACCTGCG GGAGATCGTG
GAGATCATTG ATGGTCTGCG CTTCCGGTCC CAGACGGAGA AGCATGAGCT CTCCCACCTG
TATGAAGCCA AGATCAAGAA CATGGGGAAT GCCGGGCGAA ATGGTGGGGA ATACTACACG
CCCCGCCCCC TGATTCGGGC GATTGTGCAG GTGGTGGCGC CCAAGGTCGG CGAGAAGATT
TACGACGGCG CCGTGGGTTC TGCGGGTTTT CTCTGTGAAG CCTTCGACTA TCTCAAGGCC
CAGCCGGGGC TGACCACCAG CGACATGCAG ACGCTGCAGG AGCGTACCTT CTACGGCAAA
GAGAAAAAGA GCCTGGCCTA CGTCATCGCC ATCATGAACA TGATCCTGCA TGGCATCGAT
GCGCCGAACA TCGTCCATAC CAACACCCTG GCCGAGAATC TTATGGATAT CCAGCCGAAA
GACCGGGTGG ATGTGGTGCT GGCGAATCCG CCCTTCGGTG GTAAAGAGCG AAAGGAGGTT
CAGCAGAACT TCCCCATCAA GACCGGCGAG ACGGCGTTTC TATTTCTGCA GCACTTTATC
CGTATGCTGA AGGCTGGCGG CCGGGGCGGC GTGGTCATTA AAAACACCTT TCTAAGCAAT
ACGGACAATG CCTCAGTCAG CTTACGCAAA CTGCTACTGG AAGATTGCAA CCTGCATACT
GTCTTGGATC TACCGGGCGG GACTTTTCAA GGGGCGGGAG TAAAAACCGT GGTGCTGTTC
TTTGACAAGG GCGCACCGAC CCGAAAGGTC TGGTACTACC AGCTCAACCC CGGACGGAAC
ATGGGGAAGA CGAACCCCCT CAATGACAAC GATCTGGCGG AGTTTGTCGC ACTGCAGAAG
ACCAAGGCCG ACTCGCCGCA GTCATGGACT GTGGACGTGT CCGGCATCGA CACCCGTACC
TATGACCTGT CGGCCAAAAA TCCCAATGGC GGTGATGAAA AGGTGCTGCG CAGCCCGGAA
GAGATTCTGG ACGAGATCGC CGCTCTGGAT GCCGAGAGTG CTGAGGTGCT GGCGTCTATT
CGGGGGCTGC TGTGA
|
|---|
| Protein sequence | MFEQAFKNID DILHKDAGSS SELDYTEQTS WLLFLKYLDA LEQDRAMEAE LEGRPYTFIL
EDAFRWEHWA APKTADGRMD HHKAMSGDDL RDFVNIRLFP YLSGFKRRAT GSNTIEYKIG
EIFSEIKNKI QSGYNLREIV EIIDGLRFRS QTEKHELSHL YEAKIKNMGN AGRNGGEYYT
PRPLIRAIVQ VVAPKVGEKI YDGAVGSAGF LCEAFDYLKA QPGLTTSDMQ TLQERTFYGK
EKKSLAYVIA IMNMILHGID APNIVHTNTL AENLMDIQPK DRVDVVLANP PFGGKERKEV
QQNFPIKTGE TAFLFLQHFI RMLKAGGRGG VVIKNTFLSN TDNASVSLRK LLLEDCNLHT
VLDLPGGTFQ GAGVKTVVLF FDKGAPTRKV WYYQLNPGRN MGKTNPLNDN DLAEFVALQK
TKADSPQSWT VDVSGIDTRT YDLSAKNPNG GDEKVLRSPE EILDEIAALD AESAEVLASI
RGLL
|
|---|
| |