Gene Lferr_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0216 
Symbol 
ID6876166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp203843 
End bp204613 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content60% 
IMG OID642788092 
ProductIstB domain protein ATP-binding protein 
Protein accessionYP_002218681 
Protein GI198282360 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.488281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA CCATGATTGA AATTGAGCGC GCACTGCGTG AATTACGCCT GTCCGGCATT 
CGCGCGACCT TGGACACCCG CATCCTGCAG GCCCAGGCGA ACCAGGAGCC CTTCCTGGAC
ACCTTCTCCA TGATCTTGCA GGATGAACTC GACCGGCGCC GGTCAAGCCT GATGGAGCGC
CGTTACCACA AGTCCGGCCT GGACGAACGC GCCACGCTGA CTGGCTTCGA CTGGCGCTTC
AATCCAAAAT TGCCCCGTCA GGCCTGCTTC GAACTGCACA CCCTCAAGTT TATCGCCGAA
GGTCAAAACG CCCTGATCAT CGGCAAGCCT GGCACCGGCA AGAGCCACAT CGCCAAGGCC
GTGGCCTACC AGGCGACCCT GCAAGGCCAC GACGTGCGGT ATCTGGAGGC CGACAGCATC
TTCGCGCGAT ACGCGCTGGA CAGCGGCGCA GATCAGGAGC GCCAGTTGCG TCCATTGCTC
AACGCCGACC TGGTGGTGCT TGACGACCTG TTCCTGGCTA GGCGTATCAG CGACAGCGCT
GGCGAGTTGT TGCAAACGCT GATCCACCAG CGCTACAAGC TGCGGCGCAG CATCGTCGTG
ACCTCGAACC GCGTGGTACA GGATTGGGGC AAATACCTGG GAGACAACAC GATGGCCACC
ACCATTCTCG ATCGATTGAT GCACCGATCG CATTTGCTTG AGTTCGAAGG CAAGAGCTAT
CGGCTCAAAG AGGCTGCCAC GCGATTTGCA CAAACCCCCT CAGTCAACTG A
 
Protein sequence
MSMTMIEIER ALRELRLSGI RATLDTRILQ AQANQEPFLD TFSMILQDEL DRRRSSLMER 
RYHKSGLDER ATLTGFDWRF NPKLPRQACF ELHTLKFIAE GQNALIIGKP GTGKSHIAKA
VAYQATLQGH DVRYLEADSI FARYALDSGA DQERQLRPLL NADLVVLDDL FLARRISDSA
GELLQTLIHQ RYKLRRSIVV TSNRVVQDWG KYLGDNTMAT TILDRLMHRS HLLEFEGKSY
RLKEAATRFA QTPSVN