| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0203 |
|---|
| Symbol | |
|---|
| ID | 6876153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 193249 |
|---|
| End bp | 194439 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642788080 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002218669 |
|---|
| Protein GI | 198282348 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACGT TCGCCACCAC AAAACATCCC CATACAAAGA GCAAACAGTT TTTAACAACC
CTTGCTGTCG CGATTTTGTC CACACTGGCC CTGGTATCAG ACGCCGCTCA AGCCGCGCCC
CTGCCGATGC CAGCGATGAC CGGACCGCTG CAGCCACCGT CTCCTTTTCA GTTCAATGCC
GGGCCGCTCG GAAAACTGGA CGTCACCGGC GTGATGAGCG GCATGGGCGT CTGGCAGGAC
AACCGGGTTC CCGGCGACCG GTTCACCCGC GCCGATATCA GCAATGGCCA GATCTTCATC
CAGAAAACGC ACGGGCTGAT CCAGTTCTTT CTCCAGGCCG GCGCCTACAA TATGCCCGCC
CTGGGCACAC CCTTCCTCTC TACGGGGGCC ACCACCAGCG ATTATTATGG CGCATTGCCG
CAGGCCTATC TGAAAATCGC GCCCACCAAA GACTTCTCGG TGCTGATCGG CAAGCTACCC
ACCCTGATCG GCGCGGAATA TACCTTCACC TTCGAAAACA TGAACATTGA GCGCGGCTTG
CTGTGGAACC AGGAAAACGC CGTCACGCGC GGCGTCCAAG TCAACTACAG TGCGGGGCCA
TTGAGCGCCT CCCTGTCGTG GAACGATGGG TTCTACTCCA ACCGCTTCAA CTGGCTCTCC
GGCGACCTGT CCTACACCAT CAACTCCGCC AACACCGTGA GCTTCGTGGG CATGGGCAAT
GCGGGGCAGA CGGGTTATTC CAGTCTCGCT ACCCCGGTCT ATCAAAACAA CAGCGACATC
TACAACCTGA TCTATACCTA TAGCTCGGGT CCATGGATGA TTCAGCCCTA CCTCCAGTAC
ACCCATGTGT CGGCCAATCC CGCTATCGGT GTGGGACGCG GCACGGCGAC CAAAGGCGCG
GCCATCCTGG CGAGTTATAG TCTCACCCCC CACATTACCT TGGCGGCCCG CGCCGAGTAT
ATCGCAAGCA CCGGCAATGC CACGGATGGC GCGGTCAACC TGATGTATGG ACCCGGTAGC
AAGGCATGGT CGATCACCGT GACGCCCACC TACCAGGATC ACGATTTCTT CGCCCGCGCC
GATTTTTCCT ATGTACAGGC GAGCAGCTAC ACCCAGGGCG ATGTCTTTGG CCCACAGGGA
ACCAATCCTA CACAGGCCAG AGCCCTCGTC GAAACCGGAT TCCTATTTTA A
|
|---|
| Protein sequence | MSTFATTKHP HTKSKQFLTT LAVAILSTLA LVSDAAQAAP LPMPAMTGPL QPPSPFQFNA
GPLGKLDVTG VMSGMGVWQD NRVPGDRFTR ADISNGQIFI QKTHGLIQFF LQAGAYNMPA
LGTPFLSTGA TTSDYYGALP QAYLKIAPTK DFSVLIGKLP TLIGAEYTFT FENMNIERGL
LWNQENAVTR GVQVNYSAGP LSASLSWNDG FYSNRFNWLS GDLSYTINSA NTVSFVGMGN
AGQTGYSSLA TPVYQNNSDI YNLIYTYSSG PWMIQPYLQY THVSANPAIG VGRGTATKGA
AILASYSLTP HITLAARAEY IASTGNATDG AVNLMYGPGS KAWSITVTPT YQDHDFFARA
DFSYVQASSY TQGDVFGPQG TNPTQARALV ETGFLF
|
|---|
| |