| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0200 |
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| Symbol | |
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| ID | 6876150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 189317 |
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| End bp | 190834 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642788077 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002218666 |
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| Protein GI | 198282345 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCAT CACCAGTCGG CAAGCAGGAA GATCAAAAAC TTGCGGTCAC AAGTCAAAAA
CTGGCACTTG CTACGCACTA TCATCAAACA GGTCGGCTGA AAGAGGCCGA ACAGCTTTAT
CGAAACATTC TTGTGGAGCA ACCGAACCAC GCCGAGGTTA ATAGCAATAT GGGGGTGCTG
GCTAGCCAAA CGGGCCGCAT CAATGACGCT TTATATTTTT TTCAGGCGGC GCTGGGTTCA
GATCCAAAAA ATGGGCAAAC CTGGGCTAAT TATATGCTAT TGCTTTATAA TACAGGACGC
ACTCAAGAGG CCAGTTCCGC CCTACAACAG TCATTGGCAA TTGACAAAAA CTTTTCCTTG
CTGTTTGAGG GGGTTTATAA TCAAGCATTG AATTTGCAGT GCTGGAAGGA TGTTGAAAAC
ATTTTACATA ATTTAATCGC CATAAAAAAT AGCCCATCAA ATGAGATGGC CATGCTAGGT
GAGGTGCTTC GTCGGCAAGG TAAATTATCA GATGCCGAAC GTGTTCTCTC TGATGCTCTT
AATATTAATG AAAATAATGT AGCAGCGCTC CATAATTTAT CAGTTTTGCT ACTATATCTG
AATAGATACT CGGAGGCTGA ACATGCAATC ATGAAGGTTT TATCCTTAAT GCCGGACAAT
GCCGAAAGTA TATTTATACT GGGCGCGATA TCTGTAGGAA AGAAGCGCCT TTCGGAAGGC
GAAATAGCCT TCCGAAAGGC GCTTTCCATT AAACCTGCAT ACCCGGAAGC ATTAATGAAC
CTCGGTGCCA TACTCAGCGA CCAAGGCCGT GTGGATGAGG CGATAGGCAC CTTCCGAAAA
GCCCTAACTA TCAAGCCAGA CTACCTGGAA GCGTTAATGA GGCTCGGTGT TGCACTAGGC
CGTCAGGATC GCATGGACGA GGCCGAAACC GTCCTCAGGA AGGCTCTCGC TATCAAACCG
GATTATCCAG AGGCATTAAT GAACCTGGGC GTCACACTTG GCCATGAAGG TCGATGGGAA
GAAACCGAAA CCCTCCTCCG GCAAGCACTG ACTATCAAAC CAGATTATCC AGAGGCATTA
ATGAATCTGG GTGCCGCCCT CAGCAGACAA GGCCGTTGCT TAGACGAAGC TGAAAACATC
CTCCGACGAA CACTCGCTAT CCAGCCGGAC CATCCCGATG CGTTAGTAAA CTTGGGTGCC
ACACTCAATA AACAAGGCCG CTGGAACGAA GCCGAAACCA TTCTCCGACA GGCCGTCGCC
ATTAAACCAG AGCACGCTGA CGCATTGATA AACTTGGGTG CAGTCCTCAG CAAACAAGGC
CGATTAGACG AAGCTGAAAC CATTCTCCGA CAGGCCCTCA CTATCATGCC GGACCAAGCT
GACGCACTGG TGAATCTCGG GGTCATACTT CGCCAGCGTG GCTGCCCAGA GGAAGCCAAA
ACCGCTTTTC AACAGGCGCT TACGGCTAAT CCGAATCATC CAGAGGCGCT CGTAAACCTT
GGCGCTACAA TACACTGA
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| Protein sequence | MFPSPVGKQE DQKLAVTSQK LALATHYHQT GRLKEAEQLY RNILVEQPNH AEVNSNMGVL
ASQTGRINDA LYFFQAALGS DPKNGQTWAN YMLLLYNTGR TQEASSALQQ SLAIDKNFSL
LFEGVYNQAL NLQCWKDVEN ILHNLIAIKN SPSNEMAMLG EVLRRQGKLS DAERVLSDAL
NINENNVAAL HNLSVLLLYL NRYSEAEHAI MKVLSLMPDN AESIFILGAI SVGKKRLSEG
EIAFRKALSI KPAYPEALMN LGAILSDQGR VDEAIGTFRK ALTIKPDYLE ALMRLGVALG
RQDRMDEAET VLRKALAIKP DYPEALMNLG VTLGHEGRWE ETETLLRQAL TIKPDYPEAL
MNLGAALSRQ GRCLDEAENI LRRTLAIQPD HPDALVNLGA TLNKQGRWNE AETILRQAVA
IKPEHADALI NLGAVLSKQG RLDEAETILR QALTIMPDQA DALVNLGVIL RQRGCPEEAK
TAFQQALTAN PNHPEALVNL GATIH
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