Gene Lferr_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0193 
Symbol 
ID6876143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp183550 
End bp184158 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content67% 
IMG OID642788070 
ProductMethyltransferase type 11 
Protein accessionYP_002218659 
Protein GI198282338 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.442693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGA AAGAGCACGC GGCGTTTTTC CCGGCCACGG TCATGCCCGA TCCCGACTGG 
TGGCAGGCCC TGTGGCCCGA TCCGGAGGGG GTCATCAGGG CCTTGGGTGT CAAGCCCGGC
ATAACGGTGC TGGATCTCTG CTGCGGGGAT GGCTATTTCA CCGCCGCCCT CGCCCGGCAG
GTGGAGGACG GCCGAATCCT CGGTTTCGAT CTGGACGAGC AGATGCTGGC CGCCGCCGCG
TCGGTGTGCG CCGGGCTGGA AAACTGCACC TTTCTGCAGG GCGACGCCAT GGCCCTGCAT
CGGCTGCTCC CCGAGCCGGT GGACTATTGC CTCATGGCCA ACACCTTTCA CGGCGTGCCT
GAGCAGACGG TCCTGGCCCG GGAGATCGCC CGCGTCCTGA AGCCCGGCGG GCTTTTCGCC
GTCGTCAACT GGCACGCCCG CCCCCGGGAA GAAACGCCGG TCTTGGGACA GGCCCGCGGA
CCGCGCACGG AACTGCGCAT GACGCCGGAG CAGGTGCGCG CCGTCGTCGA ACCCTCTGGT
CTCCGGCTGG ATCGCGTGGT CGAACTTTCT CCTTATCATT ACGGCGCCCT TTTCCGGCTT
CCCGGGTAA
 
Protein sequence
MDTKEHAAFF PATVMPDPDW WQALWPDPEG VIRALGVKPG ITVLDLCCGD GYFTAALARQ 
VEDGRILGFD LDEQMLAAAA SVCAGLENCT FLQGDAMALH RLLPEPVDYC LMANTFHGVP
EQTVLAREIA RVLKPGGLFA VVNWHARPRE ETPVLGQARG PRTELRMTPE QVRAVVEPSG
LRLDRVVELS PYHYGALFRL PG