Gene Lferr_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0184 
Symbol 
ID6876134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp174839 
End bp175966 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content66% 
IMG OID642788061 
Producthypothetical protein 
Protein accessionYP_002218650 
Protein GI198282329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGA ATCGACGGAA TCTCCTGGCG GCCGGCATAG TGGGCGCGTT GCTGCTCGCA 
GCGGCCTGGG CTGGGTTTGG CATGAACGGG CGTCTCGAAG CCGGCGAAAG CCATAGGGCG
GTTTCGCAGG GGCTGCCGCC GACCACCATC GCGACGCGCG GTCTGCAGGT CGTCGTCTTG
GGCCAGGCGC TGCAAGCGCA AGCCGGTATC CGGACGCAGA CGCTCGTTCC CGCGCGCTAT
CGGAGCCAAG TCCGCGCCTA TGGCCTGGTC CTCGACCCGC GGCCGCTTCT GGTATTGCGT
GCCGGCTATG CTGCCGCCTT GGGTCAACTC GGCGTGGCCC GTGCTGGCGC CACCACCTCG
CAGCGGGAAT ACGAGCGGCT GCGCCTCTTG AATCGGGACG ACCAGAACGT TTCCATCAAA
ACCGTGCAGG CGGCGCAGGG GGCGTATCAG TCGGCGCAGG CGCGCCTCGC CGCGGCATTG
ACCAACGTCG CCAATCTGCA GCAGACGGCG ATTACGCAAT GGGGACCCGT ACTGGCCCGA
TGGGCCTTGC ACCATCCCAC CGGCCCTCTG ACCCGTCTAT TCAAGGGGCA GGACGCCCTG
GTGCTGGTCA CGCTGCCGCC GGGTCTGGCC GTCCCCTCCA TGCCGACGAT TGTCCAGGTC
GACAACAGTA ATATGCCCGT ATCCGCCGCC ACCTTGGTTT CCGCTTCTCC GCAAGGCGAT
CCCAGCATCC AGGGTGAGAC CTATTTTTAT CTGATGCCCG CACGCGAGGT GCGCATGGGC
ATGCGGGTGG TGGTGGATGC GCCGCTGGCG GGGCAGACGA TGCAGGGTGC CGTGGTGCCG
GATTCCGCGG TGCTGTGGTA TGCCGATCAA GCCTGGGTCT ATCTGCAAAC CGCCGCGGAG
CATTTTGTCC GGCATCGGGT GTCCACGCAG GCTCCGGTCC GGGGCGGCTG GTTCGAGACG
GACCTCAGGC CGGGGCAACG GGTGGTGACG CAAGGGGCCC AACTACTCCT TTCCCAGGAG
ATGTTGGCCC CGTCGGCAAG CGGGGGGACA GGTGAAGGCG CAGAGGAACA CAAAGAGCAA
AAGGGTTCCG GAAGCCACGG GGCCGATGAA GACCAGGATA ACGATTAA
 
Protein sequence
MKRNRRNLLA AGIVGALLLA AAWAGFGMNG RLEAGESHRA VSQGLPPTTI ATRGLQVVVL 
GQALQAQAGI RTQTLVPARY RSQVRAYGLV LDPRPLLVLR AGYAAALGQL GVARAGATTS
QREYERLRLL NRDDQNVSIK TVQAAQGAYQ SAQARLAAAL TNVANLQQTA ITQWGPVLAR
WALHHPTGPL TRLFKGQDAL VLVTLPPGLA VPSMPTIVQV DNSNMPVSAA TLVSASPQGD
PSIQGETYFY LMPAREVRMG MRVVVDAPLA GQTMQGAVVP DSAVLWYADQ AWVYLQTAAE
HFVRHRVSTQ APVRGGWFET DLRPGQRVVT QGAQLLLSQE MLAPSASGGT GEGAEEHKEQ
KGSGSHGADE DQDND