Gene Lferr_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0182 
Symbol 
ID6876132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp171179 
End bp171448 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content62% 
IMG OID642788059 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002218648 
Protein GI198282327 
COG category[S] Function unknown 
COG ID[COG5606] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCG AACCGTTTGA CAGCGTATGG GATGCCATCG AGGACACGCC CGAGGAGGCG 
GAGAACATGA AACTCCGCTC GGCGCTGATG ATGGCGCTGA AGGACCACAT CGACCGCGCA
GGCCTCAGTC AGGCCCAGGC CGCAAAGCTA TTTGGCGTGA CTCAGCCGCG CATCTCGGAC
CTGATGCGTG GGAAGATCGG CTTGTTCGGC TTGGATGCGC TGGTCAACAT GGCTTCGGCG
GCAGGACTGC GCATCGAAGA CGCCGCTTGA
 
Protein sequence
MSSEPFDSVW DAIEDTPEEA ENMKLRSALM MALKDHIDRA GLSQAQAAKL FGVTQPRISD 
LMRGKIGLFG LDALVNMASA AGLRIEDAA