Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0181 |
Symbol | |
ID | 6876131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 169876 |
End bp | 171033 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642788058 |
Product | Integrase catalytic region |
Protein accession | YP_002218647 |
Protein GI | 198282326 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCTAT GCACGCGACA GGAGAGCGCA AAGGCTGTGG CTCGGCGATT TGGCGTGAAT CGACTAACGT TGTACAACTG GAAAAACCAG TTCCTTGGTC GCGAGGCCCC GGCATCCATG AAGCGCCGCA AGAAAGGATC CCCTTCGCTG TCTGAGAAAG AGAAACTCCA GGAAGAGATC GCATCCCTGC GTAGTGAGCT GCGACGTTTG CAGCTTGAGC ATGATCTGCT GCAAAAGGCC GGTGAACTCC TAAAAAAAGG CCTGGGCGTT GACCTGCAGC TCCTGGGGAA CCGGGAGAAG ACCTTGCTGG TTGACGCCCT CAAATCGCAG TATCCCTTGG CAGCGCTTTG TATTTGCTTG GATCTTGCCC GCAGCTCCTA CTTCTACCAC CGGGCCCGTT TGCAGATGGG GGACAAGTAT GCCGGGATCC GACACAAAAT CCGGAAAGTT TTTGAGCAGA ACTACCAGTG CTTTGGATAT CGCCGGATAC GTGCGTTCCT CGCTCGGGAG CGCATCGCGC TCTCCGAGAA AGTCGTTCAG CGTCTGATGC GGCAGGAGCA GTTGATCGTG GCGACGAAGC GGCGGCGCTA CCGCTCTTAC CTGGGAGAAA TCAGTCCGGC ACCAGAAAAC CTCCTCCATC GAGACTTCCA TGCCGAGAAG CCAAACCAGA AGTGGCTGAC GGACATCACG GAGTTCGCCC TTCCAACTGG CAAAGTGTAT CTCTCTCCCG TCATCGATTG CTTCGATGGC CTGGTCGTGA GCTGGTCCAT TGGTACCCGC CCCGATGCCA ATCTGGTGAA CTCCATGCTG GATGAGGCCA TGGAGACAGT GACGCACAGC ACCGACCGGC CCATCATCCA TTCCGATCGT GGCGCCCACT ACCGCTGGCC GGGATGGCTA TCGCGGATCC AGAGCGGGAA GTTCCTCCGA TCGATGTCCC GCAAAGGCTG CTCGCCCGAC AACGCGGCCT GCGAAGGCTT CTTTGGGAGG CTTAAGACGG AATGGTTCTA CCGCAGGGAC TGGCGAAACA CCAGCATAGA GCAGTTCATT CCGATGCTCG ATGCCTACGT CCGCTGGTAC AATGAAAAAC GAATCAAGCT CTCCCTCGGC TCTCTCAGTC CACTGGAGTA CAGGCAGAGC CTTGGGATTA TATCGTAA
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Protein sequence | MALCTRQESA KAVARRFGVN RLTLYNWKNQ FLGREAPASM KRRKKGSPSL SEKEKLQEEI ASLRSELRRL QLEHDLLQKA GELLKKGLGV DLQLLGNREK TLLVDALKSQ YPLAALCICL DLARSSYFYH RARLQMGDKY AGIRHKIRKV FEQNYQCFGY RRIRAFLARE RIALSEKVVQ RLMRQEQLIV ATKRRRYRSY LGEISPAPEN LLHRDFHAEK PNQKWLTDIT EFALPTGKVY LSPVIDCFDG LVVSWSIGTR PDANLVNSML DEAMETVTHS TDRPIIHSDR GAHYRWPGWL SRIQSGKFLR SMSRKGCSPD NAACEGFFGR LKTEWFYRRD WRNTSIEQFI PMLDAYVRWY NEKRIKLSLG SLSPLEYRQS LGIIS
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